Definition Caldivirga maquilingensis IC-167 chromosome, complete genome.
Accession NC_009954
Length 2,077,567

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The map label for this gene is 159041192

Identifier: 159041192

GI number: 159041192

Start: 646772

End: 647296

Strand: Reverse

Name: 159041192

Synonym: Cmaq_0613

Alternate gene names: NA

Gene position: 647296-646772 (Counterclockwise)

Preceding gene: 159041196

Following gene: 159041191

Centisome position: 31.16

GC content: 46.48

Gene sequence:

>525_bases
ATGCAGGTGGCCATTGCAGCCCACAGTGGTGAATACAGGGATGAGCATGTTAAAGCCGTTAAGGATGTTATAGATGGCTT
AACCCAATGTAAACCCACCATACTTCTAGGCGGCTACTGGGGATTAATGAGGGTTGTGGCTGATGAAGCCATCTCAAGGG
GGTTAAGGGTCGTGTTAATACTGCCTATTGAGAACGAGAACATTGAGGCCCCTAAGGATGCTGTAATCGTGAGGACTGGT
ATGGAGTTTAGGGAAAGGTCAGTGGTGTTAGTTAGGAGTAGTGATTCACTTATAGCTATTGGTGGGGCTGTTGGAACAAT
AATGGAGGCGCTTTTAGCATACGCCATGGGTAAACCAACCATAGTGCTTAAGGGCACGGGTTTCCCAACGGATAGACTTG
AGTTAGCCTTCCCAGATTACGTTGATGATAGGAGAACCTCCAGGATACTTTACGTAACTAATCCCCGTGAAGCCGGTAAG
TTAGCTTGTATTTCAAGTGGAATTCAGGTTAAGGAACAGGGATGA

Upstream 100 bases:

>100_bases
CATCTACTTATTCTTCTACCTTAATAAATCTGATGTTAAGAGGAGTGAATGATTTAGGAAATGAGGCAATACTTTATACC
ACCCATTTACTTAACGCAGC

Downstream 100 bases:

>100_bases
GGTTTCATCTAGGTATATAAAATGAACATAATACTGAATTAAAGGTCGTGTGAAAAACATTAAAAATAGTGAAACAGAGC
CTAATTCATGAAGTTTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG
MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK
LACISSGIQVKEQG

Sequences:

>Translated_174_residues
MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG
MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK
LACISSGIQVKEQG
>Mature_174_residues
MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLILPIENENIEAPKDAVIVRTG
MEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPTIVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGK
LACISSGIQVKEQG

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18925; Mature: 18925

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLI
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEEEEE
LPIENENIEAPKDAVIVRTGMEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPT
EEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCE
IVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGKLACISSGIQVKEQG
EEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECC
>Mature Secondary Structure
MQVAIAAHSGEYRDEHVKAVKDVIDGLTQCKPTILLGGYWGLMRVVADEAISRGLRVVLI
CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCEEEEE
LPIENENIEAPKDAVIVRTGMEFRERSVVLVRSSDSLIAIGGAVGTIMEALLAYAMGKPT
EEECCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHCCCCE
IVLKGTGFPTDRLELAFPDYVDDRRTSRILYVTNPREAGKLACISSGIQVKEQG
EEEEECCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA