| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041162
Identifier: 159041162
GI number: 159041162
Start: 613219
End: 613791
Strand: Reverse
Name: 159041162
Synonym: Cmaq_0583
Alternate gene names: NA
Gene position: 613791-613219 (Counterclockwise)
Preceding gene: 159041163
Following gene: 159041161
Centisome position: 29.54
GC content: 41.19
Gene sequence:
>573_bases ATGGCTTTATTAGTCATATCACCTGCAACAACCCTAGTCACAGTGATACTACTAGGCGCATCCCATGCAGTGGAGCCTGA CCACATAGCAACCTTAAGGCTACTGAAGGATGAAAGGGAATACTTACTCTTTGGTTTATCTCACGGTATTGGCTTCATAT TGATATCAATACCCCTGGTACTCATCATTGCAATGAATAAGGAATTGGAATTAATAGGAAACCTAGTGGGTATGGCATTC GCGGCGGCACTACTAATTGGTGAACTCATGAATAAGGAATTAGAGATCGGTGTTAAGGGATCCATGAGCTCTGGGATAAT TCAAGGTGCATTAGCAATAACACCAACTAAGGTTCTAGTGGCAGTGATGGCGGCTGAGGTAGGATTAATCACTGGAATGG TTTATATAGTACTATTCATAGCAGTATCATCAATGTTTATATTCATCATAGGGCTAACCTTGGATAAACTGGCCCAAGTG TTGATGAAGCATGATGTTTCCAAACCCATGAACATAGCCATAGCGGTAATCGCCCTAGCAATAATGACTACGCATATTGT AAACATGGTATAA
Upstream 100 bases:
>100_bases GTCCCCATGATTCATGGGAATTAATAACCGGAAATTAGGCTGCATCCACTATTAACACTGCCATAAAGAGTTAAATACAT GGTTCTAGGGGCGTTGGGAT
Downstream 100 bases:
>100_bases AGCCTTAAATTCCCTTTATAAATGCATTAATGGTATGATGATACATTGCAGTGCTGAAGAGTGAGTGAAACTGACCTGCG CTGATTACGAATCCTGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MALLVISPATTLVTVILLGASHAVEPDHIATLRLLKDEREYLLFGLSHGIGFILISIPLVLIIAMNKELELIGNLVGMAF AAALLIGELMNKELEIGVKGSMSSGIIQGALAITPTKVLVAVMAAEVGLITGMVYIVLFIAVSSMFIFIIGLTLDKLAQV LMKHDVSKPMNIAIAVIALAIMTTHIVNMV
Sequences:
>Translated_190_residues MALLVISPATTLVTVILLGASHAVEPDHIATLRLLKDEREYLLFGLSHGIGFILISIPLVLIIAMNKELELIGNLVGMAF AAALLIGELMNKELEIGVKGSMSSGIIQGALAITPTKVLVAVMAAEVGLITGMVYIVLFIAVSSMFIFIIGLTLDKLAQV LMKHDVSKPMNIAIAVIALAIMTTHIVNMV >Mature_189_residues ALLVISPATTLVTVILLGASHAVEPDHIATLRLLKDEREYLLFGLSHGIGFILISIPLVLIIAMNKELELIGNLVGMAFA AALLIGELMNKELEIGVKGSMSSGIIQGALAITPTKVLVAVMAAEVGLITGMVYIVLFIAVSSMFIFIIGLTLDKLAQVL MKHDVSKPMNIAIAVIALAIMTTHIVNMV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20154; Mature: 20023
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLVISPATTLVTVILLGASHAVEPDHIATLRLLKDEREYLLFGLSHGIGFILISIPLV CEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LIIAMNKELELIGNLVGMAFAAALLIGELMNKELEIGVKGSMSSGIIQGALAITPTKVLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHH AVMAAEVGLITGMVYIVLFIAVSSMFIFIIGLTLDKLAQVLMKHDVSKPMNIAIAVIALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IMTTHIVNMV HHHHHHHHCC >Mature Secondary Structure ALLVISPATTLVTVILLGASHAVEPDHIATLRLLKDEREYLLFGLSHGIGFILISIPLV EEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH LIIAMNKELELIGNLVGMAFAAALLIGELMNKELEIGVKGSMSSGIIQGALAITPTKVLV HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHHHHH AVMAAEVGLITGMVYIVLFIAVSSMFIFIIGLTLDKLAQVLMKHDVSKPMNIAIAVIALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IMTTHIVNMV HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA