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The map label for this gene is 159041153

Identifier: 159041153

GI number: 159041153

Start: 604438

End: 606033

Strand: Reverse

Name: 159041153

Synonym: Cmaq_0574

Alternate gene names: NA

Gene position: 606033-604438 (Counterclockwise)

Preceding gene: 159041154

Following gene: 159041149

Centisome position: 29.17

GC content: 45.99

Gene sequence:

>1596_bases
ATGAGAGATGAGAAGGTGGTTAGGATAAGGGATATAGGTAGGCGTGAGGGTAGGTTAATTAAGATAAGCCTAAGTGACTT
AATGCCTCTACCACCACCCTACGATAAGCCTGAACTAGAACCCCCCTTAACTGAACCTAAGCCTGAATGGTCAAGTAGCT
ACGTAACTGAACTTGATGGGTATGTGGCCATTGATGTACCCTGGAAACCCAGGAGTAGGGAAGAGGAGGAGAGGCTTATT
AAAGGGTTCCTGGATGGTTTAAGGAAGCTAACTTCAATGGAAGGTAATTGGACATTCCTGCAACCACTACTCCTCTCACT
GGATTACTGCGCAAAGTGCCAGAACTGCGCTGAGGCTTGCCCAATATACGTGGCCAGTGGGAGGAAGGATGCCTATAGGC
CAACGTACAGGTCTGAGGTGCTTAGGAGGATTTACGATAAGTATATTCTTAAGAAGCCTGGGGTTAATATTGAGCTTAAT
GCGCGTACGATTCTTAGGCTGGGTGAGTTAGCCTATAGGTGTACATTATGTAGGAGGTGTGTTCAAGCCTGTCCACTGGG
TATTGATAATGGGTTAATAGCCCATGAGATAAGGAAACTGCTAAGCATGGAGATGGGCATTGCACCCACGGCACTCCACG
AGAAGGGTACTATGCTTCAGCTTAAGACAGGTTCCTCAACAGGCATGAGTCCGAAGGCTTTCATGAACATGGTTGAGTTC
ATGGAGGATTTAATAAGTGAGAAGCTTGGTAGAAGAATCAGAATACCTGTTGATGAGAAGGGTGCCGATGTATTGTTAAT
TCATAATGCTGGTGAGTATATTTCATGGCCTGAGAATCCAGCTGCCTACGCGATAATTCTTGAGGAGGCTGGGGTTAGTT
GGACCCTTAGCAGTGAGTTAGTGGGTTATGATGCCGTTAACTACGGTGTATGGTATGATGATGCTCAATTAGCCAGAATA
GCCATGAAGCATATTGAGGTTGCCAGGAAGCTTGAGGTTAAGAGAATCGTTATTGGTGAATGTGGACACGCCACTAAGGC
CCTTCTTGTGGTTGCTGATAGGTTGCTTAAGGATGATTACAGGATACCCAGGGAGAGCGTACTACCAATGCTTAGGGATA
TTGTTAAGAGCGGTAAACTCAACCTTGACCCAGGTAGGAATAATTTCCCAGTGACCCTCCATGACCCATGCAACATAGTT
AGGTTAGCCGGCATAGTTGAACCCCAGAGGGAGGTGTTGAGGATGATTGCACCCATGTTTAGGGAAATGGAGCCCCACGG
CGTCTACAATTACTGCTGCGGTGGTGGCAGTGGCTTCGCCATAATGAATTCACTCAATTTCCCTGAATGGAGGATTAAGG
TCGCCTCAAGAATGAAGCTTAAACAAATCCTTGAAGCCTTTAAGGATTCAATTGACCCCAAGGTTCCGAAATACGTATGT
GCACCATGCTCCAACTGTAAGGGTGAGTTAAGGGATTTACTAACCCACTATAGGGTCACTGAGCTTTACAATATTCACTA
CGGTGGTTTAGCTGAATTAGTCGTTAACGCAATGGTTGACTTGAAGGAACCCTACTTGGACTTCACCACTCAGTAG

Upstream 100 bases:

>100_bases
AGCCGCAGGATTGAGGAATTAATGAGACTTAGGATGCCTTGGAGTGCACTCCACATTAAGTCAAATGGATCATGGGAAGA
TAACGCAAGGGTGATTAATA

Downstream 100 bases:

>100_bases
CGCCTACTGCTCATACACCATTACCTTCCTTACCCATGGTTCATTATTAAGGGAATTAAGCAGGTTAACTAATTCCCTAC
CCCTTAGCTTAAGGGTTAGT

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: HMC operon ORF 6 [H]

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MRDEKVVRIRDIGRREGRLIKISLSDLMPLPPPYDKPELEPPLTEPKPEWSSSYVTELDGYVAIDVPWKPRSREEEERLI
KGFLDGLRKLTSMEGNWTFLQPLLLSLDYCAKCQNCAEACPIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELN
ARTILRLGELAYRCTLCRRCVQACPLGIDNGLIAHEIRKLLSMEMGIAPTALHEKGTMLQLKTGSSTGMSPKAFMNMVEF
MEDLISEKLGRRIRIPVDEKGADVLLIHNAGEYISWPENPAAYAIILEEAGVSWTLSSELVGYDAVNYGVWYDDAQLARI
AMKHIEVARKLEVKRIVIGECGHATKALLVVADRLLKDDYRIPRESVLPMLRDIVKSGKLNLDPGRNNFPVTLHDPCNIV
RLAGIVEPQREVLRMIAPMFREMEPHGVYNYCCGGGSGFAIMNSLNFPEWRIKVASRMKLKQILEAFKDSIDPKVPKYVC
APCSNCKGELRDLLTHYRVTELYNIHYGGLAELVVNAMVDLKEPYLDFTTQ

Sequences:

>Translated_531_residues
MRDEKVVRIRDIGRREGRLIKISLSDLMPLPPPYDKPELEPPLTEPKPEWSSSYVTELDGYVAIDVPWKPRSREEEERLI
KGFLDGLRKLTSMEGNWTFLQPLLLSLDYCAKCQNCAEACPIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELN
ARTILRLGELAYRCTLCRRCVQACPLGIDNGLIAHEIRKLLSMEMGIAPTALHEKGTMLQLKTGSSTGMSPKAFMNMVEF
MEDLISEKLGRRIRIPVDEKGADVLLIHNAGEYISWPENPAAYAIILEEAGVSWTLSSELVGYDAVNYGVWYDDAQLARI
AMKHIEVARKLEVKRIVIGECGHATKALLVVADRLLKDDYRIPRESVLPMLRDIVKSGKLNLDPGRNNFPVTLHDPCNIV
RLAGIVEPQREVLRMIAPMFREMEPHGVYNYCCGGGSGFAIMNSLNFPEWRIKVASRMKLKQILEAFKDSIDPKVPKYVC
APCSNCKGELRDLLTHYRVTELYNIHYGGLAELVVNAMVDLKEPYLDFTTQ
>Mature_531_residues
MRDEKVVRIRDIGRREGRLIKISLSDLMPLPPPYDKPELEPPLTEPKPEWSSSYVTELDGYVAIDVPWKPRSREEEERLI
KGFLDGLRKLTSMEGNWTFLQPLLLSLDYCAKCQNCAEACPIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELN
ARTILRLGELAYRCTLCRRCVQACPLGIDNGLIAHEIRKLLSMEMGIAPTALHEKGTMLQLKTGSSTGMSPKAFMNMVEF
MEDLISEKLGRRIRIPVDEKGADVLLIHNAGEYISWPENPAAYAIILEEAGVSWTLSSELVGYDAVNYGVWYDDAQLARI
AMKHIEVARKLEVKRIVIGECGHATKALLVVADRLLKDDYRIPRESVLPMLRDIVKSGKLNLDPGRNNFPVTLHDPCNIV
RLAGIVEPQREVLRMIAPMFREMEPHGVYNYCCGGGSGFAIMNSLNFPEWRIKVASRMKLKQILEAFKDSIDPKVPKYVC
APCSNCKGELRDLLTHYRVTELYNIHYGGLAELVVNAMVDLKEPYLDFTTQ

Specific function: HMWC (high-molecular-weight cytochrome c precursor), ORF2, ORF3, ORF4, ORF5, ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfa

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 60265; Mature: 60265

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDEKVVRIRDIGRREGRLIKISLSDLMPLPPPYDKPELEPPLTEPKPEWSSSYVTELDG
CCCCCEEHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
YVAIDVPWKPRSREEEERLIKGFLDGLRKLTSMEGNWTFLQPLLLSLDYCAKCQNCAEAC
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELNARTILRLGELAYRCTLCRRC
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
VQACPLGIDNGLIAHEIRKLLSMEMGIAPTALHEKGTMLQLKTGSSTGMSPKAFMNMVEF
HHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
MEDLISEKLGRRIRIPVDEKGADVLLIHNAGEYISWPENPAAYAIILEEAGVSWTLSSEL
HHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCH
VGYDAVNYGVWYDDAQLARIAMKHIEVARKLEVKRIVIGECGHATKALLVVADRLLKDDY
HCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHC
RIPRESVLPMLRDIVKSGKLNLDPGRNNFPVTLHDPCNIVRLAGIVEPQREVLRMIAPMF
CCCHHHHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHH
REMEPHGVYNYCCGGGSGFAIMNSLNFPEWRIKVASRMKLKQILEAFKDSIDPKVPKYVC
HCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHC
APCSNCKGELRDLLTHYRVTELYNIHYGGLAELVVNAMVDLKEPYLDFTTQ
CCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRDEKVVRIRDIGRREGRLIKISLSDLMPLPPPYDKPELEPPLTEPKPEWSSSYVTELDG
CCCCCEEHHHHCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC
YVAIDVPWKPRSREEEERLIKGFLDGLRKLTSMEGNWTFLQPLLLSLDYCAKCQNCAEAC
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
PIYVASGRKDAYRPTYRSEVLRRIYDKYILKKPGVNIELNARTILRLGELAYRCTLCRRC
CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHH
VQACPLGIDNGLIAHEIRKLLSMEMGIAPTALHEKGTMLQLKTGSSTGMSPKAFMNMVEF
HHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHHHHH
MEDLISEKLGRRIRIPVDEKGADVLLIHNAGEYISWPENPAAYAIILEEAGVSWTLSSEL
HHHHHHHHHCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEECCCH
VGYDAVNYGVWYDDAQLARIAMKHIEVARKLEVKRIVIGECGHATKALLVVADRLLKDDY
HCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHC
RIPRESVLPMLRDIVKSGKLNLDPGRNNFPVTLHDPCNIVRLAGIVEPQREVLRMIAPMF
CCCHHHHHHHHHHHHHCCCEECCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHH
REMEPHGVYNYCCGGGSGFAIMNSLNFPEWRIKVASRMKLKQILEAFKDSIDPKVPKYVC
HCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHC
APCSNCKGELRDLLTHYRVTELYNIHYGGLAELVVNAMVDLKEPYLDFTTQ
CCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8335628 [H]