Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 159041060

GI number: 159041060

Start: 515908

End: 516774

Strand: Reverse

Name: etfB [H]

Synonym: Cmaq_0477

Alternate gene names: 159041060

Gene position: 516774-515908 (Counterclockwise)

Preceding gene: 159041061

Following gene: 159041059

Centisome position: 24.87

GC content: 47.29

Gene sequence:

>867_bases
ATGGGCGCCACTGTTATAAGTTCAGCAAATGCGGGCTTAACCATGGGTAAGGAGTTAACAATTATTGTGCCCGTTAAGGC
GGCTGTACCCAATATAACGGCTGTTAGGCTTGATCCAGTCACCCATAATTTAGTTAGGGAGGGTGTCCCACTGATGCTTA
ACCCCTATGATAGGAACGCCCTTGAATTCGCCCTTAGGCTTAAGGACAAGTACGGTGGGAGAGTCGTAACATTATCCATG
GCTCCACCCAGCGGTAAGGATTTCCTTGAATCCACAATAGGCATGGGTGCTGATGAGGCGTACTTAATAACAGACAGGGT
CTTCGCTGGGGCAGATACCTTAGCCACATCCTACACAGTGGCCATGACTGTTAAGAAATTCTTCCCAAGCTTCAACCTAA
TAGTCATGGGTGAGGAGACCACGGACTCTACAACAGCCCACATGCCTGCCCAAGTGGCCTCGTGGCTTAACCTACCTTAC
CTATACTACGTTGTTGACGGTGAAGTTAACCTGGAGAAGGGGACCATTAGGTTAACCCGTTACCTTGAGGATGAGGGAGT
CTACGAGGAATATGAGTACAATATGCCAGTTATAATCAGCGTCTACAAGGACAGTAACCCACCCAGGGACATTAGCTTAA
GCCGTAAGATTCAGGCTAAGTTAAGCAACCTAGTTAAGTCGGTGACTAATAATGAGCTTAAGCTTGATCCATTTTGCGTT
GGTTTAAGGGGCTCACCAACAATAGTGGCTAAGATTGAAGACGCTAAGCCAATACCTAGGAAGAAGCAGATATTCAAGGG
TGATCCAAGGGAGGCGGCTAAGTGGCTTATTGAGAACTTAACCAAGGAGGGGGTGATTAGGCTATGA

Upstream 100 bases:

>100_bases
GGAGTGTGGGACCTGTAGGATTGTTTGCCCACATAATGCAATTGAGTGGACTTACCCGAGGAGTGGTTACGGTGTTCAGT
ACAGGTTTGGGTGATGATTC

Downstream 100 bases:

>100_bases
GTAGTGCAAGAATATGCCCAGAGTGGCCTCAGGTAAATAAGAGTGAGTATAAGGGTATTTGGGTTTACATTGAGCATCAG
AATGGTGTAATAAAGGACGG

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MGATVISSANAGLTMGKELTIIVPVKAAVPNITAVRLDPVTHNLVREGVPLMLNPYDRNALEFALRLKDKYGGRVVTLSM
APPSGKDFLESTIGMGADEAYLITDRVFAGADTLATSYTVAMTVKKFFPSFNLIVMGEETTDSTTAHMPAQVASWLNLPY
LYYVVDGEVNLEKGTIRLTRYLEDEGVYEEYEYNMPVIISVYKDSNPPRDISLSRKIQAKLSNLVKSVTNNELKLDPFCV
GLRGSPTIVAKIEDAKPIPRKKQIFKGDPREAAKWLIENLTKEGVIRL

Sequences:

>Translated_288_residues
MGATVISSANAGLTMGKELTIIVPVKAAVPNITAVRLDPVTHNLVREGVPLMLNPYDRNALEFALRLKDKYGGRVVTLSM
APPSGKDFLESTIGMGADEAYLITDRVFAGADTLATSYTVAMTVKKFFPSFNLIVMGEETTDSTTAHMPAQVASWLNLPY
LYYVVDGEVNLEKGTIRLTRYLEDEGVYEEYEYNMPVIISVYKDSNPPRDISLSRKIQAKLSNLVKSVTNNELKLDPFCV
GLRGSPTIVAKIEDAKPIPRKKQIFKGDPREAAKWLIENLTKEGVIRL
>Mature_287_residues
GATVISSANAGLTMGKELTIIVPVKAAVPNITAVRLDPVTHNLVREGVPLMLNPYDRNALEFALRLKDKYGGRVVTLSMA
PPSGKDFLESTIGMGADEAYLITDRVFAGADTLATSYTVAMTVKKFFPSFNLIVMGEETTDSTTAHMPAQVASWLNLPYL
YYVVDGEVNLEKGTIRLTRYLEDEGVYEEYEYNMPVIISVYKDSNPPRDISLSRKIQAKLSNLVKSVTNNELKLDPFCVG
LRGSPTIVAKIEDAKPIPRKKQIFKGDPREAAKWLIENLTKEGVIRL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Caenorhabditis elegans, GI25141345, Length=223, Percent_Identity=28.6995515695067, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321646, Length=211, Percent_Identity=26.0663507109005, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 31818; Mature: 31687

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATVISSANAGLTMGKELTIIVPVKAAVPNITAVRLDPVTHNLVREGVPLMLNPYDRNA
CCCEEEECCCCCEEECCEEEEEEEEHHCCCCEEEEEECCHHHHHHHCCCCEEECCCCCCH
LEFALRLKDKYGGRVVTLSMAPPSGKDFLESTIGMGADEAYLITDRVFAGADTLATSYTV
HEEEEEEHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHH
AMTVKKFFPSFNLIVMGEETTDSTTAHMPAQVASWLNLPYLYYVVDGEVNLEKGTIRLTR
EEEHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEECEEEECCCEEEEEE
YLEDEGVYEEYEYNMPVIISVYKDSNPPRDISLSRKIQAKLSNLVKSVTNNELKLDPFCV
EECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECEEEE
GLRGSPTIVAKIEDAKPIPRKKQIFKGDPREAAKWLIENLTKEGVIRL
ECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GATVISSANAGLTMGKELTIIVPVKAAVPNITAVRLDPVTHNLVREGVPLMLNPYDRNA
CCEEEECCCCCEEECCEEEEEEEEHHCCCCEEEEEECCHHHHHHHCCCCEEECCCCCCH
LEFALRLKDKYGGRVVTLSMAPPSGKDFLESTIGMGADEAYLITDRVFAGADTLATSYTV
HEEEEEEHHCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHH
AMTVKKFFPSFNLIVMGEETTDSTTAHMPAQVASWLNLPYLYYVVDGEVNLEKGTIRLTR
EEEHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEECEEEECCCEEEEEE
YLEDEGVYEEYEYNMPVIISVYKDSNPPRDISLSRKIQAKLSNLVKSVTNNELKLDPFCV
EECCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECEEEE
GLRGSPTIVAKIEDAKPIPRKKQIFKGDPREAAKWLIENLTKEGVIRL
ECCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA