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The map label for this gene is frlC [C]

Identifier: 159041016

GI number: 159041016

Start: 467261

End: 468100

Strand: Reverse

Name: frlC [C]

Synonym: Cmaq_0433

Alternate gene names: 159041016

Gene position: 468100-467261 (Counterclockwise)

Preceding gene: 159041021

Following gene: 159041013

Centisome position: 22.53

GC content: 44.17

Gene sequence:

>840_bases
ATGTTTAAGCTAGGCGTAATCTCAGATGAGATTTCCCAGGATCTTGAACACGCGCTTAGGGTTGTTTCCGAACTTGGGGC
AACACACGTTGAGATTAGGGATATTTGGGGAAGGAACGCATCACAATTATCCGACTCAGAGATTACTGAGGTAAGTAACC
TGGTTAAGAAGTATGGCCTAGAGATATCTAATCTAGATTCACCTGCGTTTAAAATATACATTAATGATTCAGAATCCCAT
AGGAGGCACATTAACATCCTAAGGAGGGTAATTGAGTTATCTAAGAAGCTTGATTTAAAGTACACTAGGGTATTCACATT
CTGGTGGCAGGGAGAGTTAAGTAATTTCATGAATCAATTAATTGAACGCTTCCAACCAGCGGTGGAATTAGCTGAGAAGG
AGGGCTTCCACCTAGTTGTTGAGAATGAGTACAGCTGCATAGTTGGTACAGGTAGGGAGGCTAAGGAATTCATTAATAGA
CTTGGGAGCAGGTACGTTAGGGTTCTTTGGGATCCAGGTAACGCCTTCTTCGCCCGTGAAACCCCATACCCGCATGGGTA
TGATGCAGTCAAGGGCTTAATAATGCATATCCATGTTAAGGATGCCGCAGTGGAGAATGGGCACTATGCCTGGAAACCAG
TGGGTGGAGGTATGATTGATTACCGTGGCCAATTCAAGGCACTTATAGACAGCGGCTATAGTGGTGTGGTCTCACTGGAA
ACACACTACGTACCACCCAGTGGTAGTAAGGAGGAGGGGACTAGGGAGTCTTTTAAGGGTATTGTAAGTATCCTGAGTGA
ACTTGGGGTTGCTGATAAGGTTCTTAATTTAAGGAAGTAA

Upstream 100 bases:

>100_bases
CACTTAATTATAATTACTTGATGTTTGAAACATGATGCTTATAAAAACTGTTAGACTAAGTTTATTTAAAGCGGAACCGC
ATACTTAAAGTAGTGTCAGT

Downstream 100 bases:

>100_bases
GTGGTGGTTTTTAACCTAGCTTAGGGTTAACTTACTGTGCTTAATATGTTTCTTAGATTCCTTATACTCACCTTAACCGT
CTCAATGGGTGGCTTATACG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Sugar Phosphate Isomerase/Epimerase; TIM Barrel Xylose Isomerase; Xylose Isomerase Domain-Containing Protein TIM Barrel

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MFKLGVISDEISQDLEHALRVVSELGATHVEIRDIWGRNASQLSDSEITEVSNLVKKYGLEISNLDSPAFKIYINDSESH
RRHINILRRVIELSKKLDLKYTRVFTFWWQGELSNFMNQLIERFQPAVELAEKEGFHLVVENEYSCIVGTGREAKEFINR
LGSRYVRVLWDPGNAFFARETPYPHGYDAVKGLIMHIHVKDAAVENGHYAWKPVGGGMIDYRGQFKALIDSGYSGVVSLE
THYVPPSGSKEEGTRESFKGIVSILSELGVADKVLNLRK

Sequences:

>Translated_279_residues
MFKLGVISDEISQDLEHALRVVSELGATHVEIRDIWGRNASQLSDSEITEVSNLVKKYGLEISNLDSPAFKIYINDSESH
RRHINILRRVIELSKKLDLKYTRVFTFWWQGELSNFMNQLIERFQPAVELAEKEGFHLVVENEYSCIVGTGREAKEFINR
LGSRYVRVLWDPGNAFFARETPYPHGYDAVKGLIMHIHVKDAAVENGHYAWKPVGGGMIDYRGQFKALIDSGYSGVVSLE
THYVPPSGSKEEGTRESFKGIVSILSELGVADKVLNLRK
>Mature_279_residues
MFKLGVISDEISQDLEHALRVVSELGATHVEIRDIWGRNASQLSDSEITEVSNLVKKYGLEISNLDSPAFKIYINDSESH
RRHINILRRVIELSKKLDLKYTRVFTFWWQGELSNFMNQLIERFQPAVELAEKEGFHLVVENEYSCIVGTGREAKEFINR
LGSRYVRVLWDPGNAFFARETPYPHGYDAVKGLIMHIHVKDAAVENGHYAWKPVGGGMIDYRGQFKALIDSGYSGVVSLE
THYVPPSGSKEEGTRESFKGIVSILSELGVADKVLNLRK

Specific function: Not Clear, May Be Involved In An Isomerization Step. [C]

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31644; Mature: 31644

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLGVISDEISQDLEHALRVVSELGATHVEIRDIWGRNASQLSDSEITEVSNLVKKYGL
CEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCHHHCCHHHHHHHHHHHHHHCC
EISNLDSPAFKIYINDSESHRRHINILRRVIELSKKLDLKYTRVFTFWWQGELSNFMNQL
CEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHH
IERFQPAVELAEKEGFHLVVENEYSCIVGTGREAKEFINRLGSRYVRVLWDPGNAFFARE
HHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHEEEEEECCCCEEEEEC
TPYPHGYDAVKGLIMHIHVKDAAVENGHYAWKPVGGGMIDYRGQFKALIDSGYSGVVSLE
CCCCCCHHHHHHEEEEEEEEHHEECCCCEEEEECCCCEECCCHHHHHHHHCCCCCEEEEE
THYVPPSGSKEEGTRESFKGIVSILSELGVADKVLNLRK
EEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MFKLGVISDEISQDLEHALRVVSELGATHVEIRDIWGRNASQLSDSEITEVSNLVKKYGL
CEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCHHHCCHHHHHHHHHHHHHHCC
EISNLDSPAFKIYINDSESHRRHINILRRVIELSKKLDLKYTRVFTFWWQGELSNFMNQL
CEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHHHHHHHHH
IERFQPAVELAEKEGFHLVVENEYSCIVGTGREAKEFINRLGSRYVRVLWDPGNAFFARE
HHHHHHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHEEEEEECCCCEEEEEC
TPYPHGYDAVKGLIMHIHVKDAAVENGHYAWKPVGGGMIDYRGQFKALIDSGYSGVVSLE
CCCCCCHHHHHHEEEEEEEEHHEECCCCEEEEECCCCEECCCHHHHHHHHCCCCCEEEEE
THYVPPSGSKEEGTRESFKGIVSILSELGVADKVLNLRK
EEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA