| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159041000
Identifier: 159041000
GI number: 159041000
Start: 450896
End: 451225
Strand: Reverse
Name: 159041000
Synonym: Cmaq_0417
Alternate gene names: NA
Gene position: 451225-450896 (Counterclockwise)
Preceding gene: 159041004
Following gene: 159040999
Centisome position: 21.72
GC content: 42.12
Gene sequence:
>330_bases ATGGGTAAGAGTAGGCAGTTACTGTTAAGTAGCATTAAGGCCTTGGGGCTTGCTAATGATGCAAGTAGGAGGATTCTTGA GTTAGCCTTAATTTACGCATATAATAATAAAATAGATAAGTACTCCCTCTACTCAATACTAAGGGTTATTGACTTAAACA TGGCCACTGCAGTGAGTAGGCTTAGGCCCATTAATGATGAGGTGGCTGAGGTTAATGAAGTTGAGGTTGTTGAGGTTAAT GATGAGGTTGTGGGTAATGTTGAAAGTAGGGTTGAGGACAAGTACCTTGGGCAGAGGGTTATGGAGAGGCTGATGCCTAA TGAGCAGTGA
Upstream 100 bases:
>100_bases GCGTAATTTACGTAGCAGCTTATTTGCTTAAACTTTAAACTCATGGTGAGTACAGATTCTACACGTTAGTTTTTAATGTA GTTAATGAGAATCAGTAATC
Downstream 100 bases:
>100_bases GTCACCTTTAATTAAGCTACTTACCACCAAGTACTCTAGGTTCCTTGGGGGTATTGATGCATCAAGGGCGCTTAGGGATA ATGAGGAGGCTAGGGTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVN DEVVGNVESRVEDKYLGQRVMERLMPNEQ
Sequences:
>Translated_109_residues MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVN DEVVGNVESRVEDKYLGQRVMERLMPNEQ >Mature_108_residues GKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSRLRPINDEVAEVNEVEVVEVND EVVGNVESRVEDKYLGQRVMERLMPNEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12381; Mature: 12250
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSR CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LRPINDEVAEVNEVEVVEVNDEVVGNVESRVEDKYLGQRVMERLMPNEQ HCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GKSRQLLLSSIKALGLANDASRRILELALIYAYNNKIDKYSLYSILRVIDLNMATAVSR CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH LRPINDEVAEVNEVEVVEVNDEVVGNVESRVEDKYLGQRVMERLMPNEQ HCCCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA