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The map label for this gene is yidA [C]

Identifier: 159040843

GI number: 159040843

Start: 293862

End: 294584

Strand: Reverse

Name: yidA [C]

Synonym: Cmaq_0257

Alternate gene names: 159040843

Gene position: 294584-293862 (Counterclockwise)

Preceding gene: 159040845

Following gene: 159040836

Centisome position: 14.18

GC content: 43.02

Gene sequence:

>723_bases
ATGAATAATGTTTTACTCGCGGTGGATTACCACTACACATTAGCGAGCAAGGTGACTCAGCCTAATGTATCCGGTGATTG
GGTTAATGAATTCACTGTTAAGGATCATGTTGTAAATGCTATTGATAAATTCATTAATGCTGGTAATGAATTCGCCATTG
TAACCAGTGGGGCGCGTCGGCATGTTGAATCCATAATTGGGAGAATTAGAGGTGCCTACTTCGCCCTTGAGAATGGACTA
GTAATACTCACCCCCAGTGGTTTAAGGATTAATACTGCACCCACCAATTGGTTAAGTATAGTTGCTAGTATTAAGAGGGA
GTTGATGGAGAATGGTGTTAAGTATAGTGAGGGTGAGGTAAGCCTCTTCACGTCTGAGAGTGAATTAGTACGAAGTATTG
CTGCTAAGTATAATGTTAAGGTTGAGCCGAATAGGGGGACCTTGGCGTTAATGCCCAGTGGCATTGATAAGGGTTATGCA
ATTAGGATGCTTAGGAGGCTGATTAAGCCAAGTGCAGTGGTGGCTATTGGTGATGGGGAGAATGATGCACCAATGCTTAA
GATGGCTGATGTAGCGGTGGCTGTTGATAATGCATTACCTGAGATTAAGAGTATTGCGCATTACGTGACTAAGGGTGTTG
ATGGTGATGGCGTGGTGGAGGTTATTGAATTAATTTTATCATGTAACGGGGAGCTGGTTAAATGCCTTACCCCTGTTGGT
TAA

Upstream 100 bases:

>100_bases
TTAACTGTTAGTATGGTGGGTGTTATACATGGTTAATAAGGTTGAGGGTAATTATCATGGTGTCAAAGGTTAAAAAGCAT
ACTTAAACTGGGGTTAATTA

Downstream 100 bases:

>100_bases
GCTCCCTGGCTAATTCCTCATAAGCCTTCTTAGCCTCATCAATACTCGTCTCATCCTCCAGGGTGGTTGTATCACCGAGG
GGCTGCTTCATGAGTACTTG

Product: hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNNVLLAVDYHYTLASKVTQPNVSGDWVNEFTVKDHVVNAIDKFINAGNEFAIVTSGARRHVESIIGRIRGAYFALENGL
VILTPSGLRINTAPTNWLSIVASIKRELMENGVKYSEGEVSLFTSESELVRSIAAKYNVKVEPNRGTLALMPSGIDKGYA
IRMLRRLIKPSAVVAIGDGENDAPMLKMADVAVAVDNALPEIKSIAHYVTKGVDGDGVVEVIELILSCNGELVKCLTPVG

Sequences:

>Translated_240_residues
MNNVLLAVDYHYTLASKVTQPNVSGDWVNEFTVKDHVVNAIDKFINAGNEFAIVTSGARRHVESIIGRIRGAYFALENGL
VILTPSGLRINTAPTNWLSIVASIKRELMENGVKYSEGEVSLFTSESELVRSIAAKYNVKVEPNRGTLALMPSGIDKGYA
IRMLRRLIKPSAVVAIGDGENDAPMLKMADVAVAVDNALPEIKSIAHYVTKGVDGDGVVEVIELILSCNGELVKCLTPVG
>Mature_240_residues
MNNVLLAVDYHYTLASKVTQPNVSGDWVNEFTVKDHVVNAIDKFINAGNEFAIVTSGARRHVESIIGRIRGAYFALENGL
VILTPSGLRINTAPTNWLSIVASIKRELMENGVKYSEGEVSLFTSESELVRSIAAKYNVKVEPNRGTLALMPSGIDKGYA
IRMLRRLIKPSAVVAIGDGENDAPMLKMADVAVAVDNALPEIKSIAHYVTKGVDGDGVVEVIELILSCNGELVKCLTPVG

Specific function: Catalyzes the dephosphorylation of 2-phosphoglycolate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal SPP-like hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=78, Percent_Identity=42.3076923076923, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006382
- InterPro:   IPR006378 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 25909; Mature: 25909

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNVLLAVDYHYTLASKVTQPNVSGDWVNEFTVKDHVVNAIDKFINAGNEFAIVTSGARR
CCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
HVESIIGRIRGAYFALENGLVILTPSGLRINTAPTNWLSIVASIKRELMENGVKYSEGEV
HHHHHHHHHHHHHEEEECCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCE
SLFTSESELVRSIAAKYNVKVEPNRGTLALMPSGIDKGYAIRMLRRLIKPSAVVAIGDGE
EEEECHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC
NDAPMLKMADVAVAVDNALPEIKSIAHYVTKGVDGDGVVEVIELILSCNGELVKCLTPVG
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCC
>Mature Secondary Structure
MNNVLLAVDYHYTLASKVTQPNVSGDWVNEFTVKDHVVNAIDKFINAGNEFAIVTSGARR
CCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHH
HVESIIGRIRGAYFALENGLVILTPSGLRINTAPTNWLSIVASIKRELMENGVKYSEGEV
HHHHHHHHHHHHHEEEECCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCE
SLFTSESELVRSIAAKYNVKVEPNRGTLALMPSGIDKGYAIRMLRRLIKPSAVVAIGDGE
EEEECHHHHHHHHHHHCCEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECCCC
NDAPMLKMADVAVAVDNALPEIKSIAHYVTKGVDGDGVVEVIELILSCNGELVKCLTPVG
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]