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The map label for this gene is 159040836

Identifier: 159040836

GI number: 159040836

Start: 284481

End: 285332

Strand: Reverse

Name: 159040836

Synonym: Cmaq_0250

Alternate gene names: NA

Gene position: 285332-284481 (Counterclockwise)

Preceding gene: 159040843

Following gene: 159040834

Centisome position: 13.73

GC content: 40.49

Gene sequence:

>852_bases
GTGCAGTATATAGACTATGCAGAATGCACCTTATGCGCCTTAACGTCTAGGCTTAGTGAGTTAAAGAAGTTTAATAGGTC
TGATCCTGAATCAGTTAGGAGGATAATAGTGAGGATAGCTAATGACCTACCTCTCGGTAGGTCTAGGACATTTGCTAACT
CCTTCGAGGAGTTATCAAGTATAGTTGGTTCAGAGGACCCTTACGTCAGTGAGAAGGATCGTTATGAGAAGATAGCCAGG
GAGGTAATTGTGCCTAGGATTATTAATGCCAGTGAGGTTGAGTTGATTAAGGTGGCTGCAGCCGCTAACTCAGTTGATGT
ACCGATGTTTAATTACACGTTTAATGAGGACATGCTTATACGTAGTATTAATGAGGAGCCAATATGGTTAGGCATTAATG
AGGATGAATTATCAAATATAATGAGGAGTGCCAGGGAGGTTACGTATGTTGTTGATAATGCAGGTGAATTCGCTGTGGAT
AGTGTATTAATTAGTAAGCTAGCCACCCATTCAAGGGTGACTGTTGTAACTAGGCTTAAGCCATATGAAACCGACGTAAC
CTATGATTACGTTAGGGGAATGATTAAGGACAGTAACGTCAACATTGTTAACACAGGTAACCGTTACCCAGCTTTCCTGA
GTGATGCAATCTACGATAATTACATTAAGAAGTCTGACTTAGTGATATCAAAGGGTGTGGGTAATTTTGAGGCTTACCTG
GAGTCTGGTATAAGGCATCCCAATTCATTATTCCTACTCAAGGTTAAGTGTAAGCCGCTTCAAAGGATGCTTAACGTTGA
GTTTAATAAACCCATAATACTGCATTCAAGGTACTTAAATTCAGGGCATTGA

Upstream 100 bases:

>100_bases
TCCCGCTGTTGGACTGTGTGGCTAGAATGTAGATGCTTTTCTTCACTGGCGGTGAGTAACTTAGGTAATCTTTATTTAGG
TTACCTCCCTAACCCTCATT

Downstream 100 bases:

>100_bases
GTACGCAATTATAGGCTGTACCTAATGGCAGCCCTATCTATTGACTCAAAGATAGTTGGGTGAGCATGGGCTAGTAGGGC
AATGTCCTTCACCCTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MQYIDYAECTLCALTSRLSELKKFNRSDPESVRRIIVRIANDLPLGRSRTFANSFEELSSIVGSEDPYVSEKDRYEKIAR
EVIVPRIINASEVELIKVAAAANSVDVPMFNYTFNEDMLIRSINEEPIWLGINEDELSNIMRSAREVTYVVDNAGEFAVD
SVLISKLATHSRVTVVTRLKPYETDVTYDYVRGMIKDSNVNIVNTGNRYPAFLSDAIYDNYIKKSDLVISKGVGNFEAYL
ESGIRHPNSLFLLKVKCKPLQRMLNVEFNKPIILHSRYLNSGH

Sequences:

>Translated_283_residues
MQYIDYAECTLCALTSRLSELKKFNRSDPESVRRIIVRIANDLPLGRSRTFANSFEELSSIVGSEDPYVSEKDRYEKIAR
EVIVPRIINASEVELIKVAAAANSVDVPMFNYTFNEDMLIRSINEEPIWLGINEDELSNIMRSAREVTYVVDNAGEFAVD
SVLISKLATHSRVTVVTRLKPYETDVTYDYVRGMIKDSNVNIVNTGNRYPAFLSDAIYDNYIKKSDLVISKGVGNFEAYL
ESGIRHPNSLFLLKVKCKPLQRMLNVEFNKPIILHSRYLNSGH
>Mature_283_residues
MQYIDYAECTLCALTSRLSELKKFNRSDPESVRRIIVRIANDLPLGRSRTFANSFEELSSIVGSEDPYVSEKDRYEKIAR
EVIVPRIINASEVELIKVAAAANSVDVPMFNYTFNEDMLIRSINEEPIWLGINEDELSNIMRSAREVTYVVDNAGEFAVD
SVLISKLATHSRVTVVTRLKPYETDVTYDYVRGMIKDSNVNIVNTGNRYPAFLSDAIYDNYIKKSDLVISKGVGNFEAYL
ESGIRHPNSLFLLKVKCKPLQRMLNVEFNKPIILHSRYLNSGH

Specific function: Unknown

COG id: COG1578

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002791
- InterPro:   IPR014444 [H]

Pfam domain/function: PF01937 DUF89 [H]

EC number: NA

Molecular weight: Translated: 32219; Mature: 32219

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYIDYAECTLCALTSRLSELKKFNRSDPESVRRIIVRIANDLPLGRSRTFANSFEELSS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IVGSEDPYVSEKDRYEKIAREVIVPRIINASEVELIKVAAAANSVDVPMFNYTFNEDMLI
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCEEEEECCCCCEE
RSINEEPIWLGINEDELSNIMRSAREVTYVVDNAGEFAVDSVLISKLATHSRVTVVTRLK
EECCCCCEEEECCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEC
PYETDVTYDYVRGMIKDSNVNIVNTGNRYPAFLSDAIYDNYIKKSDLVISKGVGNFEAYL
CCCCCCCHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
ESGIRHPNSLFLLKVKCKPLQRMLNVEFNKPIILHSRYLNSGH
HHHCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MQYIDYAECTLCALTSRLSELKKFNRSDPESVRRIIVRIANDLPLGRSRTFANSFEELSS
CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IVGSEDPYVSEKDRYEKIAREVIVPRIINASEVELIKVAAAANSVDVPMFNYTFNEDMLI
HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCEEEEECCCCCEE
RSINEEPIWLGINEDELSNIMRSAREVTYVVDNAGEFAVDSVLISKLATHSRVTVVTRLK
EECCCCCEEEECCHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEEC
PYETDVTYDYVRGMIKDSNVNIVNTGNRYPAFLSDAIYDNYIKKSDLVISKGVGNFEAYL
CCCCCCCHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHH
ESGIRHPNSLFLLKVKCKPLQRMLNVEFNKPIILHSRYLNSGH
HHHCCCCCCEEEEEECCHHHHHHHCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]