| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040824
Identifier: 159040824
GI number: 159040824
Start: 274354
End: 274704
Strand: Reverse
Name: 159040824
Synonym: Cmaq_0238
Alternate gene names: NA
Gene position: 274704-274354 (Counterclockwise)
Preceding gene: 159040828
Following gene: 159040823
Centisome position: 13.22
GC content: 38.18
Gene sequence:
>351_bases ATGTCTAATGCTTATAAAGTATCACTGCTTAGAGTAATCATGGTTAGTGGTCGGTATAATGTTGAGGGTAAGGGGAGTGC TGCGAGGGGTTATGTTACATCAGCGTTCGGTAACTACGTGATGTATCGTGATAATGAGTACTGGTTAATTAGTGATAGAA GAGGCCTCAATATTCAATTGTACGATCTTAGGAATGATGCAGAGCTTAAGAGAAATATTGTAAATGAAGCCACCGATAAG GTTAAGGAATTATTCAGCAGGATAATTAGTGATGCAGGTGGTAAATTGGAACCATTACCAACAGGGGAGAGGGATCCATA TGAATGGTATAATCAATTATATGTAATGTAG
Upstream 100 bases:
>100_bases GCATTAACACAATGAACAACACCCAACACGTTAACACAGTGAAAGGCATTATAAGGCACCAACAACCCGCACAAAAACAA ACAAGTTAAGGTGAATTACG
Downstream 100 bases:
>100_bases GTGATTAATATGGTTAATGATCATTTCAACGTTATCCTAATAGCTATAGATACTTTGAGGGCTGATAGGGTTGGTTGCCT CGGCTCAGGTTACCCAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSNAYKVSLLRVIMVSGRYNVEGKGSAARGYVTSAFGNYVMYRDNEYWLISDRRGLNIQLYDLRNDAELKRNIVNEATDK VKELFSRIISDAGGKLEPLPTGERDPYEWYNQLYVM
Sequences:
>Translated_116_residues MSNAYKVSLLRVIMVSGRYNVEGKGSAARGYVTSAFGNYVMYRDNEYWLISDRRGLNIQLYDLRNDAELKRNIVNEATDK VKELFSRIISDAGGKLEPLPTGERDPYEWYNQLYVM >Mature_115_residues SNAYKVSLLRVIMVSGRYNVEGKGSAARGYVTSAFGNYVMYRDNEYWLISDRRGLNIQLYDLRNDAELKRNIVNEATDKV KELFSRIISDAGGKLEPLPTGERDPYEWYNQLYVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13412; Mature: 13281
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAYKVSLLRVIMVSGRYNVEGKGSAARGYVTSAFGNYVMYRDNEYWLISDRRGLNIQL CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCCCCEEEE YDLRNDAELKRNIVNEATDKVKELFSRIISDAGGKLEPLPTGERDPYEWYNQLYVM EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECC >Mature Secondary Structure SNAYKVSLLRVIMVSGRYNVEGKGSAARGYVTSAFGNYVMYRDNEYWLISDRRGLNIQL CCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCEEEEECCCEEEEECCCCCEEEE YDLRNDAELKRNIVNEATDKVKELFSRIISDAGGKLEPLPTGERDPYEWYNQLYVM EECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA