| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040744
Identifier: 159040744
GI number: 159040744
Start: 184205
End: 184903
Strand: Reverse
Name: 159040744
Synonym: Cmaq_0157
Alternate gene names: NA
Gene position: 184903-184205 (Counterclockwise)
Preceding gene: 159040745
Following gene: 159040743
Centisome position: 8.9
GC content: 35.48
Gene sequence:
>699_bases ATGAGTGTTGATGGAACTTCAATTATAATACTTAAGGATAAACCAGATATTAATGAATTATTAATCAAAACTCTCAAAAT ATCCACTAATAATATTATTAATGGATTAAAAAACCTTGGAGAATGCAGTAATGAAGAATGCATTAAGTATGCTGAGGAAT TTATTAACTCACTTAGTACTGACATTGAGTATCTCGCCAGTGCATACACCATGAAGGATCGCAATTATGAAACTTACATA AAAGCACTTATTAACACAGCTAAACAACTCTACAGTATTTTCAAATTCCTAATTGATAGGGGATTAATTTCAAGTGAACT ACCGAGCTACATCGATAAATTAAACCCAGATGAAGCGGAGGATTATGAGGAGCTCATTAAGAGGGTGAAGATGATATTTA AGTTAACCCCATGGGTAATAAGAAACGTAGCATGCAAGGCCTATGCTAATGGTAATCTAAACGAGAATAACTCCATCGCG TTATTACTAATAGGTGACTACTGGGACTACCTACTCAGGGGTAGAGTTAGTGATGCATTAGCATTCATGGTATCATCACT CCTGGTACTCAACAACAAGTACAAAGAAGCCCTGGAACTACTACAATCACATGAATTAGCCACTGAGGACGGCTTAAAAA TAATACTTAAACTATGTAGCCTATATGTGAAACTCTATGAATGGGGAATCACGCTGTAG
Upstream 100 bases:
>100_bases GCATACCCCGAGTCCCATGGAGGGATCAAGGTGATTGGATTGAAGGCCCAGCCGCCTGTTGGGCAAAATTTAAATAGTGT ATTAACTTTTAACTGCATGT
Downstream 100 bases:
>100_bases ATACATCTTAGATACTAGCTTAATAATTGACTTCATTGTTAATAATTTATTAAATAAATATATAATATCAGAGGGAAATG TAATAAATAATTTTGCTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MSVDGTSIIILKDKPDINELLIKTLKISTNNIINGLKNLGECSNEECIKYAEEFINSLSTDIEYLASAYTMKDRNYETYI KALINTAKQLYSIFKFLIDRGLISSELPSYIDKLNPDEAEDYEELIKRVKMIFKLTPWVIRNVACKAYANGNLNENNSIA LLLIGDYWDYLLRGRVSDALAFMVSSLLVLNNKYKEALELLQSHELATEDGLKIILKLCSLYVKLYEWGITL
Sequences:
>Translated_232_residues MSVDGTSIIILKDKPDINELLIKTLKISTNNIINGLKNLGECSNEECIKYAEEFINSLSTDIEYLASAYTMKDRNYETYI KALINTAKQLYSIFKFLIDRGLISSELPSYIDKLNPDEAEDYEELIKRVKMIFKLTPWVIRNVACKAYANGNLNENNSIA LLLIGDYWDYLLRGRVSDALAFMVSSLLVLNNKYKEALELLQSHELATEDGLKIILKLCSLYVKLYEWGITL >Mature_231_residues SVDGTSIIILKDKPDINELLIKTLKISTNNIINGLKNLGECSNEECIKYAEEFINSLSTDIEYLASAYTMKDRNYETYIK ALINTAKQLYSIFKFLIDRGLISSELPSYIDKLNPDEAEDYEELIKRVKMIFKLTPWVIRNVACKAYANGNLNENNSIAL LLIGDYWDYLLRGRVSDALAFMVSSLLVLNNKYKEALELLQSHELATEDGLKIILKLCSLYVKLYEWGITL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26516; Mature: 26385
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDGTSIIILKDKPDINELLIKTLKISTNNIINGLKNLGECSNEECIKYAEEFINSLST CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DIEYLASAYTMKDRNYETYIKALINTAKQLYSIFKFLIDRGLISSELPSYIDKLNPDEAE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH DYEELIKRVKMIFKLTPWVIRNVACKAYANGNLNENNSIALLLIGDYWDYLLRGRVSDAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH AFMVSSLLVLNNKYKEALELLQSHELATEDGLKIILKLCSLYVKLYEWGITL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVDGTSIIILKDKPDINELLIKTLKISTNNIINGLKNLGECSNEECIKYAEEFINSLST CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DIEYLASAYTMKDRNYETYIKALINTAKQLYSIFKFLIDRGLISSELPSYIDKLNPDEAE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHH DYEELIKRVKMIFKLTPWVIRNVACKAYANGNLNENNSIALLLIGDYWDYLLRGRVSDAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH AFMVSSLLVLNNKYKEALELLQSHELATEDGLKIILKLCSLYVKLYEWGITL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA