| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040743
Identifier: 159040743
GI number: 159040743
Start: 183544
End: 184227
Strand: Reverse
Name: 159040743
Synonym: Cmaq_0156
Alternate gene names: NA
Gene position: 184227-183544 (Counterclockwise)
Preceding gene: 159040744
Following gene: 159040742
Centisome position: 8.87
GC content: 24.71
Gene sequence:
>684_bases ATGAATGGGGAATCACGCTGTAGATACATCTTAGATACTAGCTTAATAATTGACTTCATTGTTAATAATTTATTAAATAA ATATATAATATCAGAGGGAAATGTAATAAATAATTTTGCTAGTTATATACTTGATATTTTACGTAGAGCGAAAATTAGTG AAATATGCATTATTAATTTAATTGCATATGAATTTTTAAATAAAATTATTGATAAAATAATTGAGATAAAATTACCAATA ACTGAATTACAAAAAATCAGCAATAATGATGTTGAGTCTTTCATTGACAGAATAAGGGATGATTTTATGAATATTGGCTT TGGCTACATTAATGTAAGCTGGTCTGATATAGAACTTGCTTCAAATATTTATAATAGAATAAGGCATAAGATCCCTAGGA AAGAGAGAAAGACCTTAATTCATAAGTTGGGTATAGGTAGAGATTTACTTTATTTCATAATATCATCTCGTAACAATGCT ATGTACATAACTAAGGATGAGAATTTCGTAAAAGGATTGATCTCAATAAGAAATATGCCTGATTTAGATATTTCCTATAA CGAGGAGGAAGAAAGGTACGATTTATCCCTTTTAATTAAAAATTATGATGTTAATATTAAAGATAAAAATATTGATAAAT GTATGATAAAAGGTAAAATTCAGTTAATAAAAATAATAAATTAA
Upstream 100 bases:
>100_bases AAGTACAAAGAAGCCCTGGAACTACTACAATCACATGAATTAGCCACTGAGGACGGCTTAAAAATAATACTTAAACTATG TAGCCTATATGTGAAACTCT
Downstream 100 bases:
>100_bases AAATCATAGAACTTCTAGACCACTTCTGAGATTTAGATTATTACGGATTTAATTACATAAGAGGTTTGGTAACCTGGCCG GGACTTGAACCCGGGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNGESRCRYILDTSLIIDFIVNNLLNKYIISEGNVINNFASYILDILRRAKISEICIINLIAYEFLNKIIDKIIEIKLPI TELQKISNNDVESFIDRIRDDFMNIGFGYINVSWSDIELASNIYNRIRHKIPRKERKTLIHKLGIGRDLLYFIISSRNNA MYITKDENFVKGLISIRNMPDLDISYNEEEERYDLSLLIKNYDVNIKDKNIDKCMIKGKIQLIKIIN
Sequences:
>Translated_227_residues MNGESRCRYILDTSLIIDFIVNNLLNKYIISEGNVINNFASYILDILRRAKISEICIINLIAYEFLNKIIDKIIEIKLPI TELQKISNNDVESFIDRIRDDFMNIGFGYINVSWSDIELASNIYNRIRHKIPRKERKTLIHKLGIGRDLLYFIISSRNNA MYITKDENFVKGLISIRNMPDLDISYNEEEERYDLSLLIKNYDVNIKDKNIDKCMIKGKIQLIKIIN >Mature_227_residues MNGESRCRYILDTSLIIDFIVNNLLNKYIISEGNVINNFASYILDILRRAKISEICIINLIAYEFLNKIIDKIIEIKLPI TELQKISNNDVESFIDRIRDDFMNIGFGYINVSWSDIELASNIYNRIRHKIPRKERKTLIHKLGIGRDLLYFIISSRNNA MYITKDENFVKGLISIRNMPDLDISYNEEEERYDLSLLIKNYDVNIKDKNIDKCMIKGKIQLIKIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26675; Mature: 26675
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGESRCRYILDTSLIIDFIVNNLLNKYIISEGNVINNFASYILDILRRAKISEICIINL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IAYEFLNKIIDKIIEIKLPITELQKISNNDVESFIDRIRDDFMNIGFGYINVSWSDIELA HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHH SNIYNRIRHKIPRKERKTLIHKLGIGRDLLYFIISSRNNAMYITKDENFVKGLISIRNMP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCEEEEECCHHHHHHHHHHCCCC DLDISYNEEEERYDLSLLIKNYDVNIKDKNIDKCMIKGKIQLIKIIN CCCCCCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHCCCEEEEEECC >Mature Secondary Structure MNGESRCRYILDTSLIIDFIVNNLLNKYIISEGNVINNFASYILDILRRAKISEICIINL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH IAYEFLNKIIDKIIEIKLPITELQKISNNDVESFIDRIRDDFMNIGFGYINVSWSDIELA HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHH SNIYNRIRHKIPRKERKTLIHKLGIGRDLLYFIISSRNNAMYITKDENFVKGLISIRNMP HHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHEEECCCCEEEEECCHHHHHHHHHHCCCC DLDISYNEEEERYDLSLLIKNYDVNIKDKNIDKCMIKGKIQLIKIIN CCCCCCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA