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The map label for this gene is 159040734

Identifier: 159040734

GI number: 159040734

Start: 173612

End: 174040

Strand: Reverse

Name: 159040734

Synonym: Cmaq_0146

Alternate gene names: NA

Gene position: 174040-173612 (Counterclockwise)

Preceding gene: 159040736

Following gene: 159040732

Centisome position: 8.38

GC content: 36.6

Gene sequence:

>429_bases
ATGTATCTAAATACATTGAGAGAAGTAGATGTAGAGAATCTAGTTAAGAACATTGATTTGAAATATATACTTAGATGTAT
CTTGAAATTGTCAATAACTGATGTTACTGTATATCACACGTTACTAAACAATAATGGTAATGATCCATTAACTGTATCAG
AAATATCAACAGCCATTAAGAAGTCCAGAAGCACCGTGGAGAAGTCACTAATGAAGCTTATTCAACTTGGATTAGTGGCT
AGGAGAGCCGTGTTAACCAGGAGGGGAGGCTATACCTACGTTTACTATGCATTACCCATTGATCACGTTAAGCAGAGGTT
GCTTCAACTCGTTAACTCGTATTATGATATAGCCAAGGAGTTAATAGAGTCAACAACATCATCAGTAATGATAAAGTCCA
TTGAGGAGTCAAGCCTAAGTGGGGAGTGA

Upstream 100 bases:

>100_bases
GTTTGAAGATTCAGACTTGGAGTAATTAAACTTGACTCATTACGGCTTCATTAGAGAAGGGTTTATAAATAGCTGCTGGC
TAACCCTCTTAGGTGGTTAG

Downstream 100 bases:

>100_bases
GTGAAAATAAGCCCCACTTAGGGGGATTTTAAACAACCCCCCTTATCCTTGGGTCCACTAGTCCATACGTTAAATCAGCT
ATGAAGTTACCTATGATCAC

Product: transcriptional regulator TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MYLNTLREVDVENLVKNIDLKYILRCILKLSITDVTVYHTLLNNNGNDPLTVSEISTAIKKSRSTVEKSLMKLIQLGLVA
RRAVLTRRGGYTYVYYALPIDHVKQRLLQLVNSYYDIAKELIESTTSSVMIKSIEESSLSGE

Sequences:

>Translated_142_residues
MYLNTLREVDVENLVKNIDLKYILRCILKLSITDVTVYHTLLNNNGNDPLTVSEISTAIKKSRSTVEKSLMKLIQLGLVA
RRAVLTRRGGYTYVYYALPIDHVKQRLLQLVNSYYDIAKELIESTTSSVMIKSIEESSLSGE
>Mature_142_residues
MYLNTLREVDVENLVKNIDLKYILRCILKLSITDVTVYHTLLNNNGNDPLTVSEISTAIKKSRSTVEKSLMKLIQLGLVA
RRAVLTRRGGYTYVYYALPIDHVKQRLLQLVNSYYDIAKELIESTTSSVMIKSIEESSLSGE

Specific function: Unknown

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 16128; Mature: 16128

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLNTLREVDVENLVKNIDLKYILRCILKLSITDVTVYHTLLNNNGNDPLTVSEISTAIK
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
KSRSTVEKSLMKLIQLGLVARRAVLTRRGGYTYVYYALPIDHVKQRLLQLVNSYYDIAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LIESTTSSVMIKSIEESSLSGE
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYLNTLREVDVENLVKNIDLKYILRCILKLSITDVTVYHTLLNNNGNDPLTVSEISTAIK
CCCCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHH
KSRSTVEKSLMKLIQLGLVARRAVLTRRGGYTYVYYALPIDHVKQRLLQLVNSYYDIAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LIESTTSSVMIKSIEESSLSGE
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]