| Definition | Caldivirga maquilingensis IC-167 chromosome, complete genome. |
|---|---|
| Accession | NC_009954 |
| Length | 2,077,567 |
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The map label for this gene is 159040658
Identifier: 159040658
GI number: 159040658
Start: 80903
End: 81235
Strand: Reverse
Name: 159040658
Synonym: Cmaq_0066
Alternate gene names: NA
Gene position: 81235-80903 (Counterclockwise)
Preceding gene: 159040663
Following gene: 159040657
Centisome position: 3.91
GC content: 33.93
Gene sequence:
>333_bases GTGGCTAAGAGTATATTTGATCTTATCACTGATATTAATGGAGTAAAGAGGGGTAAGGTAATGGTTATTCGTGAATTATT AAGGGTGCTTGAGTACGTTGATTCTTCATCAAAGGGTAATGTAGTGTACATAAGTTATAGACGTATAATAGGTATTATTC AGCATCATAGGAAGTTAAGTAATGAGGATAAGTCAATGATCAAGAGTACGCTTAGTAGTATTATTACTGATGTTAACGCG AGAAGAATTAACAAGGATAAATGCATTTACGTAGTGGATAAGGGGGCTTTATCGTTAATGATTATGAGACTTAAGGAAGC CTTAAGTGAATGA
Upstream 100 bases:
>100_bases AATTAAGGAAATTGTGCTCATAGGTTAACTTAATTCTAGGATTTTAAAACTTTTAGTCAATATACGTAAACTATTTAACA ATAATAGCCAGCAGTGGTAT
Downstream 100 bases:
>100_bases GAAGCAATACTTAAATAAATCACCTCATCGACTTAAGGTAATCATGCGGAGAAGGCTGGGGCTGAGTTAGTGATGATTAT TCAGCCGCCTAAGTTATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MAKSIFDLITDINGVKRGKVMVIRELLRVLEYVDSSSKGNVVYISYRRIIGIIQHHRKLSNEDKSMIKSTLSSIITDVNA RRINKDKCIYVVDKGALSLMIMRLKEALSE
Sequences:
>Translated_110_residues MAKSIFDLITDINGVKRGKVMVIRELLRVLEYVDSSSKGNVVYISYRRIIGIIQHHRKLSNEDKSMIKSTLSSIITDVNA RRINKDKCIYVVDKGALSLMIMRLKEALSE >Mature_109_residues AKSIFDLITDINGVKRGKVMVIRELLRVLEYVDSSSKGNVVYISYRRIIGIIQHHRKLSNEDKSMIKSTLSSIITDVNAR RINKDKCIYVVDKGALSLMIMRLKEALSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12555; Mature: 12424
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSIFDLITDINGVKRGKVMVIRELLRVLEYVDSSSKGNVVYISYRRIIGIIQHHRKLS CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCC NEDKSMIKSTLSSIITDVNARRINKDKCIYVVDKGALSLMIMRLKEALSE CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure AKSIFDLITDINGVKRGKVMVIRELLRVLEYVDSSSKGNVVYISYRRIIGIIQHHRKLS CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHCC NEDKSMIKSTLSSIITDVNARRINKDKCIYVVDKGALSLMIMRLKEALSE CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA