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The map label for this gene is ybeK [C]

Identifier: 15899767

GI number: 15899767

Start: 2817591

End: 2817854

Strand: Reverse

Name: ybeK [C]

Synonym: SSO11870

Alternate gene names: 15899767

Gene position: 2817854-2817591 (Counterclockwise)

Preceding gene: 15899768

Following gene: 15899765

Centisome position: 94.17

GC content: 35.23

Gene sequence:

>264_bases
ATGCAGATACAAAGAATGAGGGGAAATCCACATCCAGACGTTATTACAGCAGCTATAGCCATTAACCCAAAAATTATTAA
AAAATCTCATAAAGAGCACGTAGATGTTGAAACTAATGAGGGGTTGACTAGAGGTGTCACTATAATAGATTACGTGGACC
CTGGACATATTATTGGTAACAATAAACCTAACGCCGAAGTCGTATATGACATCGATTATGAGAAATTTGTCCAAATCTTA
CTAAAAACTTTAAGTTCAGATTGA

Upstream 100 bases:

>100_bases
TAATGCTATTGATCCTAATATATGAAATTTCATAAAATCCCTTAATACCAAACTTTCTAATTTTTACGTTAAGATTTATT
CACATTATAGAACATTTTCA

Downstream 100 bases:

>100_bases
GTTAATCTATCAAGTCAGAGATTTTTTTAAGTATCTTCCTTAAAGAGAAAGAGATATTCATCTTACTAACTCCTAATTGT
TTAGCTAGTTCTTGAGAGTT

Product: hypothetical protein

Products: uracil; ribose; cytosine [C]

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MQIQRMRGNPHPDVITAAIAINPKIIKKSHKEHVDVETNEGLTRGVTIIDYVDPGHIIGNNKPNAEVVYDIDYEKFVQIL
LKTLSSD

Sequences:

>Translated_87_residues
MQIQRMRGNPHPDVITAAIAINPKIIKKSHKEHVDVETNEGLTRGVTIIDYVDPGHIIGNNKPNAEVVYDIDYEKFVQIL
LKTLSSD
>Mature_87_residues
MQIQRMRGNPHPDVITAAIAINPKIIKKSHKEHVDVETNEGLTRGVTIIDYVDPGHIIGNNKPNAEVVYDIDYEKFVQIL
LKTLSSD

Specific function: Unknown

COG id: COG1957

COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9777; Mature: 9777

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQRMRGNPHPDVITAAIAINPKIIKKSHKEHVDVETNEGLTRGVTIIDYVDPGHIIGN
CCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC
NKPNAEVVYDIDYEKFVQILLKTLSSD
CCCCCEEEEECCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIQRMRGNPHPDVITAAIAINPKIIKKSHKEHVDVETNEGLTRGVTIIDYVDPGHIIGN
CCCCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECC
NKPNAEVVYDIDYEKFVQILLKTLSSD
CCCCCEEEEECCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: uridine; H2O; cytidine [C]

Specific reaction: uridine + H2O = uracil + ribose cytidine + H2O = cytosine + ribose [C]

General reaction: Pyrimidine-specific nucleoside hydrolase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA