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The map label for this gene is dppC [H]

Identifier: 15899752

GI number: 15899752

Start: 2798255

End: 2799235

Strand: Reverse

Name: dppC [H]

Synonym: SSO3047

Alternate gene names: 15899752

Gene position: 2799235-2798255 (Counterclockwise)

Preceding gene: 15899753

Following gene: 15899751

Centisome position: 93.55

GC content: 35.17

Gene sequence:

>981_bases
GTGTATAAGATGGCCAGCAGAAAGTTAAATACTTTTAATTTAAAAATAGATAAGTACGGTCCGGTTTATAATCTAATAAG
AGGTGTGTGGGAACAAAGAGTATCAAGAGTTGGGTTCTATATACTACTAGGGATAATAGTATTTTCCTTAATAGGAGTAT
TTTATACTCCATACAATCCAAGCGCGACTAACTTTCCTAGGGATCTACCACCCTCACCTCAACACCTATTAGGCACAGAT
GACTATGGTCATGATATTTTTTCTCAACTTTTAGTAGGTGGATTTCCAGTAATTGGAGTAGGTTTTGCTGTAGGTTTAAT
AGGTACGCTAATAGCTATCCTCATAGGAGTAACCGCAGGATTATATGCAGAGACGATAATTGATAGAATATTAAGTGCAA
TAACTCAGATTTTCTTAATAATACCCGGTATTTTGATTATCGAATTAATAGGAGCATATCTAGGGGCATTACAGTTTAAA
CTAGGGTATATAACAATTTTGCTTACTCTTTCATTAACTGGTTGGGCATGGGGTGCTAGGGTTTTGAGATCTTTAGTATT
ATCGTTAAGGAGAAGGGAGTATATATTATCTTCTGATCTTATTGGAGAATCTAAATTAAGTGTAATTTTCAATCAAATTA
TACCTAATAATCTACCGTTCATAGCGTCAAACTTCTTCTTTACTGCAATTTATGGAATAGCTGGCTTTACATTCATTTAT
TATTTTGGATTGGGTAGTCTAACACAAGTAAATTGGGGAACTATGCTTTATTGGTCCTTAGGAGGGGAGGCTTATCTAAG
AGGATTATGGTGGTGGTACATTCCTCCTGGGCTTATGATTGGTTTAGTAGCGTTTTCGTTCGCTTTAATAAACATAGGGA
TTGATAGAGTTGCGAATCCAAGGCTAAGGATATGGGACGTAAAGAAATATATGAAGAAAATAGAAAAAACAAAAGAGAAG
GAGGAAGTGATGACTAGATGA

Upstream 100 bases:

>100_bases
ATATTTTTCATGTTAGTTACTGCGATGGTATTAAGTAATTTCGTCGCAGACATAATTTACACAATAATAGATCCTAGGAC
AAGTCAAGAGGAGACGGAGG

Downstream 100 bases:

>100_bases
GCGAAATTTCAATATCGGTAAAAAACTTAAACGTAGGTTACTTATCGGACTACGGTATAATAAAAGTCCTAAGAAATGTC
AGTATTGACATCCCGGAAAG

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MYKMASRKLNTFNLKIDKYGPVYNLIRGVWEQRVSRVGFYILLGIIVFSLIGVFYTPYNPSATNFPRDLPPSPQHLLGTD
DYGHDIFSQLLVGGFPVIGVGFAVGLIGTLIAILIGVTAGLYAETIIDRILSAITQIFLIIPGILIIELIGAYLGALQFK
LGYITILLTLSLTGWAWGARVLRSLVLSLRRREYILSSDLIGESKLSVIFNQIIPNNLPFIASNFFFTAIYGIAGFTFIY
YFGLGSLTQVNWGTMLYWSLGGEAYLRGLWWWYIPPGLMIGLVAFSFALINIGIDRVANPRLRIWDVKKYMKKIEKTKEK
EEVMTR

Sequences:

>Translated_326_residues
MYKMASRKLNTFNLKIDKYGPVYNLIRGVWEQRVSRVGFYILLGIIVFSLIGVFYTPYNPSATNFPRDLPPSPQHLLGTD
DYGHDIFSQLLVGGFPVIGVGFAVGLIGTLIAILIGVTAGLYAETIIDRILSAITQIFLIIPGILIIELIGAYLGALQFK
LGYITILLTLSLTGWAWGARVLRSLVLSLRRREYILSSDLIGESKLSVIFNQIIPNNLPFIASNFFFTAIYGIAGFTFIY
YFGLGSLTQVNWGTMLYWSLGGEAYLRGLWWWYIPPGLMIGLVAFSFALINIGIDRVANPRLRIWDVKKYMKKIEKTKEK
EEVMTR
>Mature_326_residues
MYKMASRKLNTFNLKIDKYGPVYNLIRGVWEQRVSRVGFYILLGIIVFSLIGVFYTPYNPSATNFPRDLPPSPQHLLGTD
DYGHDIFSQLLVGGFPVIGVGFAVGLIGTLIAILIGVTAGLYAETIIDRILSAITQIFLIIPGILIIELIGAYLGALQFK
LGYITILLTLSLTGWAWGARVLRSLVLSLRRREYILSSDLIGESKLSVIFNQIIPNNLPFIASNFFFTAIYGIAGFTFIY
YFGLGSLTQVNWGTMLYWSLGGEAYLRGLWWWYIPPGLMIGLVAFSFALINIGIDRVANPRLRIWDVKKYMKKIEKTKEK
EEVMTR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=270, Percent_Identity=32.2222222222222, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI1789889, Length=260, Percent_Identity=29.2307692307692, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1787054, Length=288, Percent_Identity=26.0416666666667, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789964, Length=264, Percent_Identity=29.5454545454545, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787549, Length=239, Percent_Identity=25.9414225941423, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36705; Mature: 36705

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKMASRKLNTFNLKIDKYGPVYNLIRGVWEQRVSRVGFYILLGIIVFSLIGVFYTPYNP
CCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SATNFPRDLPPSPQHLLGTDDYGHDIFSQLLVGGFPVIGVGFAVGLIGTLIAILIGVTAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYAETIIDRILSAITQIFLIIPGILIIELIGAYLGALQFKLGYITILLTLSLTGWAWGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRSLVLSLRRREYILSSDLIGESKLSVIFNQIIPNNLPFIASNFFFTAIYGIAGFTFIY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFGLGSLTQVNWGTMLYWSLGGEAYLRGLWWWYIPPGLMIGLVAFSFALINIGIDRVANP
HHCCCCCEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
RLRIWDVKKYMKKIEKTKEKEEVMTR
CEEEEHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKMASRKLNTFNLKIDKYGPVYNLIRGVWEQRVSRVGFYILLGIIVFSLIGVFYTPYNP
CCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SATNFPRDLPPSPQHLLGTDDYGHDIFSQLLVGGFPVIGVGFAVGLIGTLIAILIGVTAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYAETIIDRILSAITQIFLIIPGILIIELIGAYLGALQFKLGYITILLTLSLTGWAWGAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLRSLVLSLRRREYILSSDLIGESKLSVIFNQIIPNNLPFIASNFFFTAIYGIAGFTFIY
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
YFGLGSLTQVNWGTMLYWSLGGEAYLRGLWWWYIPPGLMIGLVAFSFALINIGIDRVANP
HHCCCCCEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
RLRIWDVKKYMKKIEKTKEKEEVMTR
CEEEEHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]