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The map label for this gene is ycjS [H]

Identifier: 15899722

GI number: 15899722

Start: 2761902

End: 2762969

Strand: Direct

Name: ycjS [H]

Synonym: SSO3015

Alternate gene names: 15899722

Gene position: 2761902-2762969 (Clockwise)

Preceding gene: 15899720

Following gene: 15899724

Centisome position: 92.3

GC content: 37.36

Gene sequence:

>1068_bases
ATGAAAATCAGATACGGTATCATAGGAGTAGGTGGTCATGGAAAAAATAGACATTTAATCCCATTGATTAAATTAAAAAA
TAAAGTAGAAATTGTAGCAGTAGCTGACGTAAAAAAGGAAAGATGCGAAGAGGTATCCTCCCAATTCAATATTAAATGTT
ACTTAGACTATATGGAGATGGTTGAAAAGGAATCGCTTAACGCTGTAAGTATTGTCACACCAACGGGATTACATTCTAGG
ATAGCCATAAATGTGCTAAATAAGGGAGTCAATGTGTTAGTAGATAAACCGCTAGGGTCCAATTTAGAAGAAGTTAAAGA
GGTAGTTAATACGGCTAGAAATAAGGGATTAAAGCTAATGGTAGGATACTGGAGTAGATTTTCTCCAGCATTACAATACG
GTAAGGAAATTATTCACAATGGTCTATTGGGAGAGCCTTATGTAGCCTATGGATATTTAGTAAGGAGGAGAGGCATACCA
GGTATTCCGACATTCATTGATAAGACGCTTTCTGGAGGAAGAGGCGCGTTATTAGACATAGGATGCTATTTAATAGATAA
TTTGCTTAGCTTGTTAAAATTTAGAAAGCCAATAAGCGTAATGGGTAAGGTATATACGAAATTCGGAAACGTTAAGGAGG
AGGTAAAGTTTAATTGGGGTTCTTGGGATCCGGAGAATTTCAGCTTAGACGACTACGCTGTTGGATTAGTAAAACTTGAA
GGTGATGTAAGTTTAATACTAGAAGTTGGCTGGTCAGCAAACGTATCTCACGTGGAGGAGAAAAGTTACGTAAGAATATT
AGGGGATAAGGGTGGAATCGAGGGAAGCGGACATGAGGCAATCGTGGATATATCTTTCCACAGTAGAACTGAGAACTTCC
TTACTGATACTAAACCAGTCTTAAGGAAAGTTGACCCATACTTCGAAATGATAAATGCTTTTGTAGATAGCATTTTAACA
GATAGGGAACCTCCAATAACTGGTGAGGAGAGCGTAACTCTTCATTCTATTATTGATGGTATATATAAGTCGTCAACGGA
GGATAAGGAAGTAAAAATCTCACTCTAA

Upstream 100 bases:

>100_bases
AAGGTTCTCAATCTCTAACGGGATATCTCTTCCATCTTTTTAACCACTATTAAATTTTAGTACATGATAGTTTAAAACCT
TTTGAAGGATATTATACCTA

Downstream 100 bases:

>100_bases
GGGCTTATATAAGGCTTTGGGATTGTTACTACCCATATCGAGCTTAGCTTTTTCACTTATGTTTAAGGAGAGAAACTCCC
TTAAGTTATACGAGATACTC

Product: dehydrogenase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKIRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVADVKKERCEEVSSQFNIKCYLDYMEMVEKESLNAVSIVTPTGLHSR
IAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLMVGYWSRFSPALQYGKEIIHNGLLGEPYVAYGYLVRRRGIP
GIPTFIDKTLSGGRGALLDIGCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVGLVKLE
GDVSLILEVGWSANVSHVEEKSYVRILGDKGGIEGSGHEAIVDISFHSRTENFLTDTKPVLRKVDPYFEMINAFVDSILT
DREPPITGEESVTLHSIIDGIYKSSTEDKEVKISL

Sequences:

>Translated_355_residues
MKIRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVADVKKERCEEVSSQFNIKCYLDYMEMVEKESLNAVSIVTPTGLHSR
IAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLMVGYWSRFSPALQYGKEIIHNGLLGEPYVAYGYLVRRRGIP
GIPTFIDKTLSGGRGALLDIGCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVGLVKLE
GDVSLILEVGWSANVSHVEEKSYVRILGDKGGIEGSGHEAIVDISFHSRTENFLTDTKPVLRKVDPYFEMINAFVDSILT
DREPPITGEESVTLHSIIDGIYKSSTEDKEVKISL
>Mature_355_residues
MKIRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVADVKKERCEEVSSQFNIKCYLDYMEMVEKESLNAVSIVTPTGLHSR
IAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLMVGYWSRFSPALQYGKEIIHNGLLGEPYVAYGYLVRRRGIP
GIPTFIDKTLSGGRGALLDIGCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVGLVKLE
GDVSLILEVGWSANVSHVEEKSYVRILGDKGGIEGSGHEAIVDISFHSRTENFLTDTKPVLRKVDPYFEMINAFVDSILT
DREPPITGEESVTLHSIIDGIYKSSTEDKEVKISL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=206, Percent_Identity=31.5533980582524, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1787574, Length=357, Percent_Identity=26.3305322128852, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1787307, Length=128, Percent_Identity=29.6875, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24581117, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39546; Mature: 39546

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVADVKKERCEEVSSQFNIKCYLDYMEM
CEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHCCEEEEEHHHHH
VEKESLNAVSIVTPTGLHSRIAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLM
HHHCCCCEEEEECCCCCCHHEEEEEHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VGYWSRFSPALQYGKEIIHNGLLGEPYVAYGYLVRRRGIPGIPTFIDKTLSGGRGALLDI
EECHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
GCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVGLVKLE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCEEEEEEEEC
GDVSLILEVGWSANVSHVEEKSYVRILGDKGGIEGSGHEAIVDISFHSRTENFLTDTKPV
CCEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHCCHHH
LRKVDPYFEMINAFVDSILTDREPPITGEESVTLHSIIDGIYKSSTEDKEVKISL
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MKIRYGIIGVGGHGKNRHLIPLIKLKNKVEIVAVADVKKERCEEVSSQFNIKCYLDYMEM
CEEEEEEEEECCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHHCCEEEEEHHHHH
VEKESLNAVSIVTPTGLHSRIAINVLNKGVNVLVDKPLGSNLEEVKEVVNTARNKGLKLM
HHHCCCCEEEEECCCCCCHHEEEEEHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VGYWSRFSPALQYGKEIIHNGLLGEPYVAYGYLVRRRGIPGIPTFIDKTLSGGRGALLDI
EECHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHH
GCYLIDNLLSLLKFRKPISVMGKVYTKFGNVKEEVKFNWGSWDPENFSLDDYAVGLVKLE
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHEEECCCCCCCCCCCCCCEEEEEEEEC
GDVSLILEVGWSANVSHVEEKSYVRILGDKGGIEGSGHEAIVDISFHSRTENFLTDTKPV
CCEEEEEEECCCCCCHHHCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCHHHHHCCHHH
LRKVDPYFEMINAFVDSILTDREPPITGEESVTLHSIIDGIYKSSTEDKEVKISL
HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]