Click here to switch to the map view.

The map label for this gene is gfo [H]

Identifier: 15899720

GI number: 15899720

Start: 2759451

End: 2760410

Strand: Direct

Name: gfo [H]

Synonym: SSO3013

Alternate gene names: 15899720

Gene position: 2759451-2760410 (Clockwise)

Preceding gene: 15899718

Following gene: 15899722

Centisome position: 92.22

GC content: 38.65

Gene sequence:

>960_bases
ATGAAAATTGCTGTAGTTGGATGTGACGGCTTCGGAAAAGTACATTTAAGGGCTATGAGAAATATAAGTGGAATAGAGTA
TTATGTTTTCAGTAGGAACGAGGAAAAGGCAAGAGAATGTATGAAAGAGTTTAACGCTGAAGGTTATTTTACAAGGTACG
AGGACGTTATAAAATCGAATGTTGATATTGTTGACTTACTAGTGAGCCATGATCAGCATTACCCCATGGGAGTAATGGCA
ATGAAGGCTGGAAAGCACTTAATGTTAGAAAAACCAATAGCGAGAACAATAGAAGAGGCTATGGGATTGATAAACACTTC
AAAAGACACCAAAAGAAAATTCATGGTTTTGGAGCAGTTCTACTTTGAATCATCAGTTAGAAAGGCTAAAGAACTTTTAC
CTAGATTAGGTAATTTATCCCTAATAATTGTGAGATCAATTCACTTGTATCAACCAAAGGGGTGGAGGAGAGAAAAGGAG
AAAATGGGAGGAGGAGCGCTTATAGATGGTGGAGTTCATTTCATAGATACATTGCTGAACTTAGGTGGGGAATACGAAAG
TGTAAGGGGAGTTTGTGGAAAGTACTTCTCGGGAATAGAGGGAGAAGATCTAACCTTGGCTACCCTTAGGTTCAGGAAAG
GACATCTAGGTTTATTAATGTATAGCTGGACAACTCCAAATCCTCCCAAAGTACCAGCATTTGAGATTTATGGCGAAAAT
GGGAGTATTATAGAAGATCCTAATACGAGAGTTATGGGGAAGGCTTATGGGGATCTAATATTGAACGTTGACGGTAAGGA
GGAGAGAATAGAAGTCGAAAAGGTGAATCCAATAGAGGAGGAAATAAGGGGATTTGTAAAGGCAGTCAAAAATAATACCG
AAGTACCTATGCCTCCTGAAATTGCCTTAAGGGATTTAAAGGCAGTCCTTGATATTTATAAGTCATGCGGATATTCCTAA

Upstream 100 bases:

>100_bases
TTCACAAATAGCCCTATTTTTTGATTTAACTTAAAAAGATTTCTATTACCGCACGATAAAAGGTAATGTTTAAATATTTA
AAAAACAAGAGAATAGGACT

Downstream 100 bases:

>100_bases
AAAATCTGTTCTATTCTTTTCATGTAATCATCTCTTAAATTGATATTTAGGGCTGATAGGTTATCTTCCAAGTGTTCTAT
TTTACTCGCTCCTATAAGTG

Product: dehydrogenase, putative

Products: NA

Alternate protein names: GFOR [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKIAVVGCDGFGKVHLRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKSNVDIVDLLVSHDQHYPMGVMA
MKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQFYFESSVRKAKELLPRLGNLSLIIVRSIHLYQPKGWRREKE
KMGGGALIDGGVHFIDTLLNLGGEYESVRGVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNPPKVPAFEIYGEN
GSIIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPEIALRDLKAVLDIYKSCGYS

Sequences:

>Translated_319_residues
MKIAVVGCDGFGKVHLRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKSNVDIVDLLVSHDQHYPMGVMA
MKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQFYFESSVRKAKELLPRLGNLSLIIVRSIHLYQPKGWRREKE
KMGGGALIDGGVHFIDTLLNLGGEYESVRGVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNPPKVPAFEIYGEN
GSIIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPEIALRDLKAVLDIYKSCGYS
>Mature_319_residues
MKIAVVGCDGFGKVHLRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKSNVDIVDLLVSHDQHYPMGVMA
MKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQFYFESSVRKAKELLPRLGNLSLIIVRSIHLYQPKGWRREKE
KMGGGALIDGGVHFIDTLLNLGGEYESVRGVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNPPKVPAFEIYGEN
GSIIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPEIALRDLKAVLDIYKSCGYS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323975, Length=227, Percent_Identity=25.5506607929515, Blast_Score=76, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008354
- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104
- InterPro:   IPR006311 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: =1.1.99.28 [H]

Molecular weight: Translated: 36095; Mature: 36095

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAVVGCDGFGKVHLRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKSN
CEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCC
VDIVDLLVSHDQHYPMGVMAMKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQF
CHHEEHHHHCCCCCCCHHEEECCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YFESSVRKAKELLPRLGNLSLIIVRSIHLYQPKGWRREKEKMGGGALIDGGVHFIDTLLN
HHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHCCCCEEECCHHHHHHHHHH
LGGEYESVRGVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNPPKVPAFEIYGEN
CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCC
GSIIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPE
CCEEECCCCEEEEEECCCEEEECCCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHH
IALRDLKAVLDIYKSCGYS
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKIAVVGCDGFGKVHLRAMRNISGIEYYVFSRNEEKARECMKEFNAEGYFTRYEDVIKSN
CEEEEEECCCCCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHCC
VDIVDLLVSHDQHYPMGVMAMKAGKHLMLEKPIARTIEEAMGLINTSKDTKRKFMVLEQF
CHHEEHHHHCCCCCCCHHEEECCCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YFESSVRKAKELLPRLGNLSLIIVRSIHLYQPKGWRREKEKMGGGALIDGGVHFIDTLLN
HHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHCCCCEEECCHHHHHHHHHH
LGGEYESVRGVCGKYFSGIEGEDLTLATLRFRKGHLGLLMYSWTTPNPPKVPAFEIYGEN
CCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCC
GSIIEDPNTRVMGKAYGDLILNVDGKEERIEVEKVNPIEEEIRGFVKAVKNNTEVPMPPE
CCEEECCCCEEEEEECCCEEEECCCCHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHH
IALRDLKAVLDIYKSCGYS
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1537789; 8472911; 8994968 [H]