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The map label for this gene is codA [H]

Identifier: 15899485

GI number: 15899485

Start: 2527607

End: 2528839

Strand: Direct

Name: codA [H]

Synonym: SSO2770

Alternate gene names: 15899485

Gene position: 2527607-2528839 (Clockwise)

Preceding gene: 15899484

Following gene: 15899486

Centisome position: 84.47

GC content: 38.12

Gene sequence:

>1233_bases
ATGTTTACGATAAGAAATGCAAAACTGCTAGATGGAAGGATTGTAGATGTTGGAATAGAAGGCGAGAAGATAGTTTGTCT
AGGGGAATGTGAAGATAATGACGAATTAATAGATGCTGAAAATAAATTAGTAATCCCACCATACTTTAACATGCACTTCC
ATTTAGATAGTGCTTTTACTAAAGCTGTAAATAAAAGCGGTACATTATGGGAAGGAATAAGGATATGGCAAGATATAAGG
AATAAGATAAGCGAGGATGAGGTAGTTAGAAACGCGCTAACTGCGGTAAAACTATTCGTGGCATACGGTACTCTTTGGAT
AAGGTCACACGTTGACATTACTGAGAGATCCTTCAAACTATTAAGAGCTATAAATAGGGTTAAGGATGAGAGTAGGGATA
TAGCTGATATACAAATTACCGCATTCCCCCAAGACGGGATATTTACCGAAAAGGGGAATGACGAACTTCTTAGAAAGGCT
TTAGAAAATGGCGCAGACAATGTTGGGTTAATTCCTCACAATGAAATTACTAGAGAGGATGGTTTCAAGTCAATTAAATA
TGCATTTGAGCTAGCCAAGGAATATAATAAGGACGTTGATGGACATATCGATGAAACCGATGATCCCAATTCAAGATATT
TAGAAGTGTTGGCAAAGGAAACAATAAATAATGAATGGTACGGAAGAGTTACCGCTGGTCATGTTACTGCGATGCATAGT
TGGGATTCAGCATATAGGTTCAGAATTTTACCGTACGTTGCGAGGGCTGGAATAACTGTAGTGCCAAATCCTTTGATAAA
CGTTGTTCTCCAAGGGAGATTTGATGGGTATCCTAAAAGGAGAGGAATGGCTCCCATAAAGGAAATGCTATATGCAAACG
TTAACGTTACATTAGGTCATGATTGTATTATGGACCCTTGGTATCCCTTAGGAATAGGAAATATGTTACAAGTTCTCTTT
ATGGCTATCCATTTGGATCAAATGATGGGTATTAACGAGTTGGTTTCCTCAATCAACTTGATAACTTTTAATGGAGCTAA
AGCTTGGAGAGTAAAGAACTATGGGATTGAAGTTGGTAATGAGGCGAATTTGCTAGTAACTGATGCTGATGACGTTATAG
ATTTGATTCGTTTCATGTGGCCTCCTAGATTTGTGATAAGGAAGGGAAAGGTGATAGCTAAGGAAGGTAAGTACGTCCTA
TTCAAAGGCAAATGGGAGAGGATAAAAGGTTGA

Upstream 100 bases:

>100_bases
TACTAAAAATAGTTATGAGGACAGTAAGAGAACTTCAAACTAAGACCGCAGCTGCCAGTGACTATAATAGATAAAAGGGC
TCTACTTAATATTTTACCAA

Downstream 100 bases:

>100_bases
GTTATAGTTTTATTAACTTACTTTCATAATTCGGATTATGGATGTGAGTGTATTCCTTGCCGCATTAGGAATATCCCTTC
TTGAACTAACTGAAGCTGGT

Product: cytosine deaminase (codA)

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MFTIRNAKLLDGRIVDVGIEGEKIVCLGECEDNDELIDAENKLVIPPYFNMHFHLDSAFTKAVNKSGTLWEGIRIWQDIR
NKISEDEVVRNALTAVKLFVAYGTLWIRSHVDITERSFKLLRAINRVKDESRDIADIQITAFPQDGIFTEKGNDELLRKA
LENGADNVGLIPHNEITREDGFKSIKYAFELAKEYNKDVDGHIDETDDPNSRYLEVLAKETINNEWYGRVTAGHVTAMHS
WDSAYRFRILPYVARAGITVVPNPLINVVLQGRFDGYPKRRGMAPIKEMLYANVNVTLGHDCIMDPWYPLGIGNMLQVLF
MAIHLDQMMGINELVSSINLITFNGAKAWRVKNYGIEVGNEANLLVTDADDVIDLIRFMWPPRFVIRKGKVIAKEGKYVL
FKGKWERIKG

Sequences:

>Translated_410_residues
MFTIRNAKLLDGRIVDVGIEGEKIVCLGECEDNDELIDAENKLVIPPYFNMHFHLDSAFTKAVNKSGTLWEGIRIWQDIR
NKISEDEVVRNALTAVKLFVAYGTLWIRSHVDITERSFKLLRAINRVKDESRDIADIQITAFPQDGIFTEKGNDELLRKA
LENGADNVGLIPHNEITREDGFKSIKYAFELAKEYNKDVDGHIDETDDPNSRYLEVLAKETINNEWYGRVTAGHVTAMHS
WDSAYRFRILPYVARAGITVVPNPLINVVLQGRFDGYPKRRGMAPIKEMLYANVNVTLGHDCIMDPWYPLGIGNMLQVLF
MAIHLDQMMGINELVSSINLITFNGAKAWRVKNYGIEVGNEANLLVTDADDVIDLIRFMWPPRFVIRKGKVIAKEGKYVL
FKGKWERIKG
>Mature_410_residues
MFTIRNAKLLDGRIVDVGIEGEKIVCLGECEDNDELIDAENKLVIPPYFNMHFHLDSAFTKAVNKSGTLWEGIRIWQDIR
NKISEDEVVRNALTAVKLFVAYGTLWIRSHVDITERSFKLLRAINRVKDESRDIADIQITAFPQDGIFTEKGNDELLRKA
LENGADNVGLIPHNEITREDGFKSIKYAFELAKEYNKDVDGHIDETDDPNSRYLEVLAKETINNEWYGRVTAGHVTAMHS
WDSAYRFRILPYVARAGITVVPNPLINVVLQGRFDGYPKRRGMAPIKEMLYANVNVTLGHDCIMDPWYPLGIGNMLQVLF
MAIHLDQMMGINELVSSINLITFNGAKAWRVKNYGIEVGNEANLLVTDADDVIDLIRFMWPPRFVIRKGKVIAKEGKYVL
FKGKWERIKG

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=361, Percent_Identity=44.5983379501385, Blast_Score=325, Evalue=4e-90,
Organism=Escherichia coli, GI1786517, Length=398, Percent_Identity=23.6180904522613, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 46732; Mature: 46732

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTIRNAKLLDGRIVDVGIEGEKIVCLGECEDNDELIDAENKLVIPPYFNMHFHLDSAFT
CEEECCCEEECCEEEEEECCCCEEEEEECCCCCCCEECCCCCEEECCCCCEEEEECHHHH
KAVNKSGTLWEGIRIWQDIRNKISEDEVVRNALTAVKLFVAYGTLWIRSHVDITERSFKL
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
LRAINRVKDESRDIADIQITAFPQDGIFTEKGNDELLRKALENGADNVGLIPHNEITRED
HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHC
GFKSIKYAFELAKEYNKDVDGHIDETDDPNSRYLEVLAKETINNEWYGRVTAGHVTAMHS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEEEEC
WDSAYRFRILPYVARAGITVVPNPLINVVLQGRFDGYPKRRGMAPIKEMLYANVNVTLGH
CCCCCEEEEEHHHHHCCCEECCCHHHHHEEECCCCCCCCCCCCCHHHHHHHCCCEEEECC
DCIMDPWYPLGIGNMLQVLFMAIHLDQMMGINELVSSINLITFNGAKAWRVKNYGIEVGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCEEEEEECCEEECC
EANLLVTDADDVIDLIRFMWPPRFVIRKGKVIAKEGKYVLFKGKWERIKG
CCCEEEECHHHHHHHHHHHCCCHHEEECCCEEEECCCEEEEECCHHCCCC
>Mature Secondary Structure
MFTIRNAKLLDGRIVDVGIEGEKIVCLGECEDNDELIDAENKLVIPPYFNMHFHLDSAFT
CEEECCCEEECCEEEEEECCCCEEEEEECCCCCCCEECCCCCEEECCCCCEEEEECHHHH
KAVNKSGTLWEGIRIWQDIRNKISEDEVVRNALTAVKLFVAYGTLWIRSHVDITERSFKL
HHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHH
LRAINRVKDESRDIADIQITAFPQDGIFTEKGNDELLRKALENGADNVGLIPHNEITRED
HHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHC
GFKSIKYAFELAKEYNKDVDGHIDETDDPNSRYLEVLAKETINNEWYGRVTAGHVTAMHS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECEEEEEEC
WDSAYRFRILPYVARAGITVVPNPLINVVLQGRFDGYPKRRGMAPIKEMLYANVNVTLGH
CCCCCEEEEEHHHHHCCCEECCCHHHHHEEECCCCCCCCCCCCCHHHHHHHCCCEEEECC
DCIMDPWYPLGIGNMLQVLFMAIHLDQMMGINELVSSINLITFNGAKAWRVKNYGIEVGN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCEEEEECCCCEEEEEECCEEECC
EANLLVTDADDVIDLIRFMWPPRFVIRKGKVIAKEGKYVLFKGKWERIKG
CCCEEEECHHHHHHHHHHHCCCHHEEECCCEEEECCCEEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]