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The map label for this gene is yggB [C]

Identifier: 15899484

GI number: 15899484

Start: 2526654

End: 2527580

Strand: Direct

Name: yggB [C]

Synonym: SSO2769

Alternate gene names: 15899484

Gene position: 2526654-2527580 (Clockwise)

Preceding gene: 15899482

Following gene: 15899485

Centisome position: 84.44

GC content: 36.25

Gene sequence:

>927_bases
ATGGCTTTAAACGAAAGAAGAGTAATAGCACTCATCTTAACTGTAGTATTAGCTGGAATAGCACTCGGCGGTGGTGTTTT
CGTACTATCCAGCGTATTTAAGATAATACCTGCTGATTATCTACTCTATATTTACGCTGCAATTTGGTTTATAGTTGCGG
TTATTGTTTCGTACTTTATAGGCTCTCTTATTAGGAATAGATTAGGAGATGTAATAGGTTACGATAACGCTAGCAGTATT
TCATTTGTAGTTAGACTAATTGGATATATCATAGCATTCGTAGGATTCTTTGTACTAATTAGGGTAAGTTTGGGTACTGC
GTTAGCTGCTGGTGGTTTCGCGGGATTAGTGTTAGGTTTAGCTGCCCAAGACGTTCTTGCCAACATATTCGGCGGGATAA
TGATAGTGATTTCTAGGCCATATAAGGTAGGAGACAGAGTGACGGTATCAACGTGGCAATATGGTTTATTAGCTCCAACC
TATCCTCCAAAGTTCTTCTCTAATGATTTTTTGATCCCAGGTTACACCGGTACAGTAACAGACATTTCATTACTTTATAC
TACAATATTTACAGACGACCAGATTCCAGTAAAGATACCTAATAGTATAATGATTCAAGCTGCAATTTTCATTCATAATG
GGGAGGAGAAAAGGAAGGTCAGAACTAAGTATGAAGTCTCCAAGGATATAGATCCAGATGTTTTAATTAACGTTCTTAAG
GAAAAAATAAAGAAACTGGATTTCGTAATCGAAGAACCTTCAATTAAAGTGCTTGAAACTACATTAAACACATACATTTT
AGGAATAGATACGATCTGTAAAACTATATATGAAGAACCTCCAAGAAGCGAAATACTAAAAATAGTTATGAGGACAGTAA
GAGAACTTCAAACTAAGACCGCAGCTGCCAGTGACTATAATAGATAA

Upstream 100 bases:

>100_bases
TTAGATCTGTAATAATCCTTAAATCCTTATAAAAATTCGATAAATCTACAAAGTAACTTTAAACATAAACAATATAAACG
ATTATCCAAAAGGTAATACT

Downstream 100 bases:

>100_bases
AAGGGCTCTACTTAATATTTTACCAAATGTTTACGATAAGAAATGCAAAACTGCTAGATGGAAGGATTGTAGATGTTGGA
ATAGAAGGCGAGAAGATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MALNERRVIALILTVVLAGIALGGGVFVLSSVFKIIPADYLLYIYAAIWFIVAVIVSYFIGSLIRNRLGDVIGYDNASSI
SFVVRLIGYIIAFVGFFVLIRVSLGTALAAGGFAGLVLGLAAQDVLANIFGGIMIVISRPYKVGDRVTVSTWQYGLLAPT
YPPKFFSNDFLIPGYTGTVTDISLLYTTIFTDDQIPVKIPNSIMIQAAIFIHNGEEKRKVRTKYEVSKDIDPDVLINVLK
EKIKKLDFVIEEPSIKVLETTLNTYILGIDTICKTIYEEPPRSEILKIVMRTVRELQTKTAAASDYNR

Sequences:

>Translated_308_residues
MALNERRVIALILTVVLAGIALGGGVFVLSSVFKIIPADYLLYIYAAIWFIVAVIVSYFIGSLIRNRLGDVIGYDNASSI
SFVVRLIGYIIAFVGFFVLIRVSLGTALAAGGFAGLVLGLAAQDVLANIFGGIMIVISRPYKVGDRVTVSTWQYGLLAPT
YPPKFFSNDFLIPGYTGTVTDISLLYTTIFTDDQIPVKIPNSIMIQAAIFIHNGEEKRKVRTKYEVSKDIDPDVLINVLK
EKIKKLDFVIEEPSIKVLETTLNTYILGIDTICKTIYEEPPRSEILKIVMRTVRELQTKTAAASDYNR
>Mature_307_residues
ALNERRVIALILTVVLAGIALGGGVFVLSSVFKIIPADYLLYIYAAIWFIVAVIVSYFIGSLIRNRLGDVIGYDNASSIS
FVVRLIGYIIAFVGFFVLIRVSLGTALAAGGFAGLVLGLAAQDVLANIFGGIMIVISRPYKVGDRVTVSTWQYGLLAPTY
PPKFFSNDFLIPGYTGTVTDISLLYTTIFTDDQIPVKIPNSIMIQAAIFIHNGEEKRKVRTKYEVSKDIDPDVLINVLKE
KIKKLDFVIEEPSIKVLETTLNTYILGIDTICKTIYEEPPRSEILKIVMRTVRELQTKTAAASDYNR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014
- InterPro:   IPR008910 [H]

Pfam domain/function: PF00924 MS_channel; PF05552 TM_helix [H]

EC number: NA

Molecular weight: Translated: 34032; Mature: 33900

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNERRVIALILTVVLAGIALGGGVFVLSSVFKIIPADYLLYIYAAIWFIVAVIVSYFI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLIRNRLGDVIGYDNASSISFVVRLIGYIIAFVGFFVLIRVSLGTALAAGGFAGLVLGL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AAQDVLANIFGGIMIVISRPYKVGDRVTVSTWQYGLLAPTYPPKFFSNDFLIPGYTGTVT
HHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCHHH
DISLLYTTIFTDDQIPVKIPNSIMIQAAIFIHNGEEKRKVRTKYEVSKDIDPDVLINVLK
HHHHHHHHHCCCCCCCEECCCHHEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHH
EKIKKLDFVIEEPSIKVLETTLNTYILGIDTICKTIYEEPPRSEILKIVMRTVRELQTKT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AAASDYNR
HHHCCCCC
>Mature Secondary Structure 
ALNERRVIALILTVVLAGIALGGGVFVLSSVFKIIPADYLLYIYAAIWFIVAVIVSYFI
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLIRNRLGDVIGYDNASSISFVVRLIGYIIAFVGFFVLIRVSLGTALAAGGFAGLVLGL
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AAQDVLANIFGGIMIVISRPYKVGDRVTVSTWQYGLLAPTYPPKFFSNDFLIPGYTGTVT
HHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCHHH
DISLLYTTIFTDDQIPVKIPNSIMIQAAIFIHNGEEKRKVRTKYEVSKDIDPDVLINVLK
HHHHHHHHHCCCCCCCEECCCHHEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHH
EKIKKLDFVIEEPSIKVLETTLNTYILGIDTICKTIYEEPPRSEILKIVMRTVRELQTKT
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
AAASDYNR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]