Click here to switch to the map view.

The map label for this gene is 15899408

Identifier: 15899408

GI number: 15899408

Start: 2444148

End: 2444459

Strand: Direct

Name: 15899408

Synonym: SSO2687

Alternate gene names: NA

Gene position: 2444148-2444459 (Clockwise)

Preceding gene: 15899400

Following gene: 15899410

Centisome position: 81.68

GC content: 32.37

Gene sequence:

>312_bases
ATGGCGAAAAATCGCCATTCTCTTCATCCTATAAAAACTAAAAACTTCTTCCTTATATATAATCTTGTGAAAATTAAGGA
TGCGATAAATAGGGTTAGATGGAAATATAAGGAGAAGATTGACGATTACGTCATTGTGATAAAGGATAAGTTAACTGAGA
CTGGACTAAAAGAGATCCCCTTTACGGATATTTATACTGTAGATAACAATTATTTGTATCTTAAAGGAGAAGATACTATA
ATTCCACTCCATAGGGTACTTATGATTAGGAGAAAAAGTGATGATGCGTTGATTTGGAAACGTGGAGATTAA

Upstream 100 bases:

>100_bases
TGGATTAATATACCCGCACTTCGGACATTGTTTTGGCATTTGTAAGATAATTCTCTTCCCAGTTTATATCAGTTATGCGC
CCGGCCATTCACCAATCATA

Downstream 100 bases:

>100_bases
GCTTTTTAACGTCTAATTATTGAATAAAGTTTTTATTGATCTTTTCATAAACATATATTTATGAGCAGTAGGAAAATTAT
ACCCACTAAGCTACCAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MAKNRHSLHPIKTKNFFLIYNLVKIKDAINRVRWKYKEKIDDYVIVIKDKLTETGLKEIPFTDIYTVDNNYLYLKGEDTI
IPLHRVLMIRRKSDDALIWKRGD

Sequences:

>Translated_103_residues
MAKNRHSLHPIKTKNFFLIYNLVKIKDAINRVRWKYKEKIDDYVIVIKDKLTETGLKEIPFTDIYTVDNNYLYLKGEDTI
IPLHRVLMIRRKSDDALIWKRGD
>Mature_102_residues
AKNRHSLHPIKTKNFFLIYNLVKIKDAINRVRWKYKEKIDDYVIVIKDKLTETGLKEIPFTDIYTVDNNYLYLKGEDTII
PLHRVLMIRRKSDDALIWKRGD

Specific function: Unknown

COG id: COG1531

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0248 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007547 [H]

Pfam domain/function: PF04457 DUF504 [H]

EC number: NA

Molecular weight: Translated: 12379; Mature: 12248

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNRHSLHPIKTKNFFLIYNLVKIKDAINRVRWKYKEKIDDYVIVIKDKLTETGLKEIP
CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
FTDIYTVDNNYLYLKGEDTIIPLHRVLMIRRKSDDALIWKRGD
CEEEEEECCCEEEEECCCCEECCCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure 
AKNRHSLHPIKTKNFFLIYNLVKIKDAINRVRWKYKEKIDDYVIVIKDKLTETGLKEIP
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
FTDIYTVDNNYLYLKGEDTIIPLHRVLMIRRKSDDALIWKRGD
CEEEEEECCCEEEEECCCCEECCCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]