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The map label for this gene is appB [H]

Identifier: 15899391

GI number: 15899391

Start: 2423999

End: 2425000

Strand: Reverse

Name: appB [H]

Synonym: SSO2668

Alternate gene names: 15899391

Gene position: 2425000-2423999 (Counterclockwise)

Preceding gene: 15899393

Following gene: 15899388

Centisome position: 81.04

GC content: 34.73

Gene sequence:

>1002_bases
ATGAACTATAAGTGGTTAATTAGAAGATTAGCTTCAGTGATTATTGCAATATTTGTTACAATAGTCATAAGCTGGGCCTT
GTTGGAATTTTCTCCTTATTCACCTGCAAATTATATAATGCAATTCATAAATCCACAAGATTTCGCTCAAAAACCTGAAC
TGTACGCTTCACTCATAGATTATCTGAACACTCTTAGGCCGCATGGAAACCCTTTGATCAATGCAGTAAATTATATATGG
AATACATTACATGGAAATCTTGGCTTCTCTATAATAAGCAATGTACCAGTAGCTGAGCTAATTGCAGTTGCCTTACCGTG
GACATTATTCATTGTAGTAACATCCATTCTAATAAGTTTCTTCCTTGGTATAAGACTTGGTCAAAAACTAGGATACCTAA
GGGGAACAAAGACGGATTCCGTAGCTACTGTTTCTTTATCAATACTGAGATCAGTACCGATTTACATTTACGCCGTATTA
CTAATTTATATACTTGCATTTATATATCATATATTCCCCACAGGTGGAGCCTATAGTATTCATGTAACACCGGGATTTAA
TCTTCCTTTCATAGCTAGCGTATTATACCATGCATTTTTACCAATACTTACATTAACAATAGTTAATTTAGTTGGGTGGA
TCTTACAGATGAGAGCAAATACAATATATGTACTGGGTGAAGACTTCGTCAACTTTGCTGAAATCTCTGGAGTTAAAAAA
GATATAATAGAAAAGAAGTATATCGGAAAGAATGCGATACTACCCCTATATACTAGCTTAATCATATCAATAGGGTTCTC
ATTCAGTGGATCGGTTTTCGTAGAGCAAACCTTCTCCTATCCCGGAGTAGGAAACTTGTTAATTAACTCCATAACCTCTA
ATGATTATCCCACTGAAATGGGAGTATTTATCATAATAATAGTAGCAGTAATTGTGGGTAATTTAATTGCAGACCTAACA
TATTCATTCCTAGATCCCAGAGCTAAAGTAGGTGAAGAATAA

Upstream 100 bases:

>100_bases
CATAAATATTATTTTGTATTGTCTAGCTTATAAACTTTGTTAAAACTCTAATGATACAGCTCAGAAACACTTATATCTTA
TTAAAAAGTAATAGTAATGC

Downstream 100 bases:

>100_bases
TGGAAGCATATAGAACCCTAATGAGTATAGGTTATACGCTATTGCTCCTTGACATTTTTTCACTGTTAATTTATAGGAGT
CCTACCACCTTATTTTCGCA

Product: ABC transporter, permease protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MNYKWLIRRLASVIIAIFVTIVISWALLEFSPYSPANYIMQFINPQDFAQKPELYASLIDYLNTLRPHGNPLINAVNYIW
NTLHGNLGFSIISNVPVAELIAVALPWTLFIVVTSILISFFLGIRLGQKLGYLRGTKTDSVATVSLSILRSVPIYIYAVL
LIYILAFIYHIFPTGGAYSIHVTPGFNLPFIASVLYHAFLPILTLTIVNLVGWILQMRANTIYVLGEDFVNFAEISGVKK
DIIEKKYIGKNAILPLYTSLIISIGFSFSGSVFVEQTFSYPGVGNLLINSITSNDYPTEMGVFIIIIVAVIVGNLIADLT
YSFLDPRAKVGEE

Sequences:

>Translated_333_residues
MNYKWLIRRLASVIIAIFVTIVISWALLEFSPYSPANYIMQFINPQDFAQKPELYASLIDYLNTLRPHGNPLINAVNYIW
NTLHGNLGFSIISNVPVAELIAVALPWTLFIVVTSILISFFLGIRLGQKLGYLRGTKTDSVATVSLSILRSVPIYIYAVL
LIYILAFIYHIFPTGGAYSIHVTPGFNLPFIASVLYHAFLPILTLTIVNLVGWILQMRANTIYVLGEDFVNFAEISGVKK
DIIEKKYIGKNAILPLYTSLIISIGFSFSGSVFVEQTFSYPGVGNLLINSITSNDYPTEMGVFIIIIVAVIVGNLIADLT
YSFLDPRAKVGEE
>Mature_333_residues
MNYKWLIRRLASVIIAIFVTIVISWALLEFSPYSPANYIMQFINPQDFAQKPELYASLIDYLNTLRPHGNPLINAVNYIW
NTLHGNLGFSIISNVPVAELIAVALPWTLFIVVTSILISFFLGIRLGQKLGYLRGTKTDSVATVSLSILRSVPIYIYAVL
LIYILAFIYHIFPTGGAYSIHVTPGFNLPFIASVLYHAFLPILTLTIVNLVGWILQMRANTIYVLGEDFVNFAEISGVKK
DIIEKKYIGKNAILPLYTSLIISIGFSFSGSVFVEQTFSYPGVGNLLINSITSNDYPTEMGVFIIIIVAVIVGNLIADLT
YSFLDPRAKVGEE

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=344, Percent_Identity=27.3255813953488, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1787053, Length=328, Percent_Identity=28.0487804878049, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789888, Length=329, Percent_Identity=24.9240121580547, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787550, Length=336, Percent_Identity=23.2142857142857, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787761, Length=269, Percent_Identity=29.368029739777, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787497, Length=331, Percent_Identity=23.8670694864048, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788504, Length=255, Percent_Identity=26.2745098039216, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37061; Mature: 37061

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKWLIRRLASVIIAIFVTIVISWALLEFSPYSPANYIMQFINPQDFAQKPELYASLID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHH
YLNTLRPHGNPLINAVNYIWNTLHGNLGFSIISNVPVAELIAVALPWTLFIVVTSILISF
HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLGIRLGQKLGYLRGTKTDSVATVSLSILRSVPIYIYAVLLIYILAFIYHIFPTGGAYSI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HVTPGFNLPFIASVLYHAFLPILTLTIVNLVGWILQMRANTIYVLGEDFVNFAEISGVKK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHH
DIIEKKYIGKNAILPLYTSLIISIGFSFSGSVFVEQTFSYPGVGNLLINSITSNDYPTEM
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH
GVFIIIIVAVIVGNLIADLTYSFLDPRAKVGEE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MNYKWLIRRLASVIIAIFVTIVISWALLEFSPYSPANYIMQFINPQDFAQKPELYASLID
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCHHHHHHHHH
YLNTLRPHGNPLINAVNYIWNTLHGNLGFSIISNVPVAELIAVALPWTLFIVVTSILISF
HHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FLGIRLGQKLGYLRGTKTDSVATVSLSILRSVPIYIYAVLLIYILAFIYHIFPTGGAYSI
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
HVTPGFNLPFIASVLYHAFLPILTLTIVNLVGWILQMRANTIYVLGEDFVNFAEISGVKK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHH
DIIEKKYIGKNAILPLYTSLIISIGFSFSGSVFVEQTFSYPGVGNLLINSITSNDYPTEM
HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHH
GVFIIIIVAVIVGNLIADLTYSFLDPRAKVGEE
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]