Click here to switch to the map view.

The map label for this gene is sdhC [H]

Identifier: 15899116

GI number: 15899116

Start: 2153347

End: 2154228

Strand: Direct

Name: sdhC [H]

Synonym: SSO2358

Alternate gene names: 15899116

Gene position: 2153347-2154228 (Clockwise)

Preceding gene: 15899115

Following gene: 15899117

Centisome position: 71.96

GC content: 39.46

Gene sequence:

>882_bases
GTGATAGGAATGAAAATAGCTTATTATCCTGGATGTGCAACCCATGGTCTATCTAAGGATGTAGATATAGCCACAAAAAA
GGTAGCAGAAGTACTTGGGGTTGAGCTAGTTGAAGTACCAGATTGGAACTGTTGTGGTGGTGGATTTTATGATGAGTATG
ACGAAGTTGGTCATGTAGCCCTTAACTTAAGGAATTTATCGCAAGTAGAAAAGATGGGTCTTACGAAAATGGTAACACCA
TGTAGCGTGTGCCTTCATAGTCATAGATTAGCTACATATAAATATAAAGAGGATAAAGATATAAAAAGGAAGACTGATAA
AAGACTAGAGGGCACTTCAGTTAAATATGAGGGAAAAGTCGATGCAGAACACATAGTTTGGGTTCTGTTAAGAGATGTAG
GATTAGAAAATATTAAGAAACACGTTAAGAAACCTCTGACTGCACTTAAAGTAGGCACTTATTACGGATGCCAAATGTTA
AGACCAGAGCAAATAATGGGATTTGAGAAGGCTTATAATCCCAGTAGTTTATCTGAACTAGTTGCAGTTACTGGGGCTAC
ACCGGTTCCTTTTCCTGCCATGACCTCATGTTGTGGATTTCCACTAGTTGGAAGTAATCCTAAAGGCGCTTTGAAGTTGG
CATTTAACGTTCTTAATAGCGCTAAACAGTCTGGAGCTGATTTAGTAATACATCCATGCAGCCTATGTCACCTTCAGTTG
GACTCCTTACAGTTAAAGGTTAAGGCTGAATTTAACATAGGTTGGACTATGCCTGCAATATATGTGACGCAGCTATTGGG
TTTATCCTTCGGTTTCAGTCCTGAGGAACTAGGAATAGGAAAGCTTGCGATTGAGGTACTACGAAGTAAGGGAGTGATAT
GA

Upstream 100 bases:

>100_bases
TCGATCTAGTGTACATGTCAAAGACAGGGAAGCTTAAATACGCATTAGTTCAAGAGAGACCTGTACAAAATATAAACGAA
ATCAAAAAGATTATAGGTGA

Downstream 100 bases:

>100_bases
ATGAGTGAGGAAATCAAAAAAGTTATTCAAGATATTGGGGGAAAGCCAGATGAATGGGTTAATGTTTCCGAAAGGCCAGG
AAAGGAACCATTTGCGAAGG

Product: succinate dehydrogenase subunit C (sdhC)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIGMKIAYYPGCATHGLSKDVDIATKKVAEVLGVELVEVPDWNCCGGGFYDEYDEVGHVALNLRNLSQVEKMGLTKMVTP
CSVCLHSHRLATYKYKEDKDIKRKTDKRLEGTSVKYEGKVDAEHIVWVLLRDVGLENIKKHVKKPLTALKVGTYYGCQML
RPEQIMGFEKAYNPSSLSELVAVTGATPVPFPAMTSCCGFPLVGSNPKGALKLAFNVLNSAKQSGADLVIHPCSLCHLQL
DSLQLKVKAEFNIGWTMPAIYVTQLLGLSFGFSPEELGIGKLAIEVLRSKGVI

Sequences:

>Translated_293_residues
MIGMKIAYYPGCATHGLSKDVDIATKKVAEVLGVELVEVPDWNCCGGGFYDEYDEVGHVALNLRNLSQVEKMGLTKMVTP
CSVCLHSHRLATYKYKEDKDIKRKTDKRLEGTSVKYEGKVDAEHIVWVLLRDVGLENIKKHVKKPLTALKVGTYYGCQML
RPEQIMGFEKAYNPSSLSELVAVTGATPVPFPAMTSCCGFPLVGSNPKGALKLAFNVLNSAKQSGADLVIHPCSLCHLQL
DSLQLKVKAEFNIGWTMPAIYVTQLLGLSFGFSPEELGIGKLAIEVLRSKGVI
>Mature_293_residues
MIGMKIAYYPGCATHGLSKDVDIATKKVAEVLGVELVEVPDWNCCGGGFYDEYDEVGHVALNLRNLSQVEKMGLTKMVTP
CSVCLHSHRLATYKYKEDKDIKRKTDKRLEGTSVKYEGKVDAEHIVWVLLRDVGLENIKKHVKKPLTALKVGTYYGCQML
RPEQIMGFEKAYNPSSLSELVAVTGATPVPFPAMTSCCGFPLVGSNPKGALKLAFNVLNSAKQSGADLVIHPCSLCHLQL
DSLQLKVKAEFNIGWTMPAIYVTQLLGLSFGFSPEELGIGKLAIEVLRSKGVI

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 32094; Mature: 32094

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMKIAYYPGCATHGLSKDVDIATKKVAEVLGVELVEVPDWNCCGGGFYDEYDEVGHVA
CCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEE
LNLRNLSQVEKMGLTKMVTPCSVCLHSHRLATYKYKEDKDIKRKTDKRLEGTSVKYEGKV
EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCCEEECCCC
DAEHIVWVLLRDVGLENIKKHVKKPLTALKVGTYYGCQMLRPEQIMGFEKAYNPSSLSEL
CHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCEECCHHHHHCHHHCCCHHHHHHH
VAVTGATPVPFPAMTSCCGFPLVGSNPKGALKLAFNVLNSAKQSGADLVIHPCSLCHLQL
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHEEEE
DSLQLKVKAEFNIGWTMPAIYVTQLLGLSFGFSPEELGIGKLAIEVLRSKGVI
CCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIGMKIAYYPGCATHGLSKDVDIATKKVAEVLGVELVEVPDWNCCGGGFYDEYDEVGHVA
CCCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHEE
LNLRNLSQVEKMGLTKMVTPCSVCLHSHRLATYKYKEDKDIKRKTDKRLEGTSVKYEGKV
EEHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCCCEEECCCC
DAEHIVWVLLRDVGLENIKKHVKKPLTALKVGTYYGCQMLRPEQIMGFEKAYNPSSLSEL
CHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCEECCHHHHHCHHHCCCHHHHHHH
VAVTGATPVPFPAMTSCCGFPLVGSNPKGALKLAFNVLNSAKQSGADLVIHPCSLCHLQL
HHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHEEEE
DSLQLKVKAEFNIGWTMPAIYVTQLLGLSFGFSPEELGIGKLAIEVLRSKGVI
CCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]