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The map label for this gene is 15898847

Identifier: 15898847

GI number: 15898847

Start: 1876243

End: 1876875

Strand: Direct

Name: 15898847

Synonym: SSO2058

Alternate gene names: NA

Gene position: 1876243-1876875 (Clockwise)

Preceding gene: 15898841

Following gene: 15898849

Centisome position: 62.7

GC content: 34.44

Gene sequence:

>633_bases
ATGATTAACTTGATTAAACATGTAGATATAGTTGTAAGCCATGAAGATTGTTGGACTTCACACATGCCATTTACCGCATA
TACTATTAATTTAGAAGTTTATCCACATAAGAACTATTTAAGGAGTAGGATTCTTATCGATTCAATGGAAAATAAGGTTA
TATCAAACTTAATGAAAACACACAGAAGCGTTATAAAGGTTATGAAGGTAGATAGGTTTAAGGGAGGAACTTATGTGGAT
TTTTTAAATAAATACAAGGGATCAATAGCTGGGGTCCTCTACGATAAGGAAGTGTTGATTCTGGGTAATCTCATAGAAGG
TAAAGACGAAAAATGGTCATTTGTAACTTCCAGCAAAAATCTTCGAGAGATTCTTACTGAGATCGAAAGTTTAGGAAAGG
TGAAAAGAGTGGAGACAACTGACTTTAACCCAATTCTCTACCCTAATCTGACTGAATGGGAAAAGAAAGTGCTTACGGTA
TCCTATTCCTATGGTTATTTAGACTATCCCAGAAGAGCAACTGCCGATGAATTAGCTAAGCTATTAGGAATAAGTAAAGT
AACGTTCCTCTATCATTTGAGAAATGCCCAAAGGAAGTTAATTGCGTTTTCCATAAAAAACATTTTAGCTTAG

Upstream 100 bases:

>100_bases
CTATATTAAACTAGTTTAATAAACATACGACTAACAGTATACTATATTATAGTTTCTTATAATACATAACATTTATATTT
TTAAAGAGTTTAAATAGTAC

Downstream 100 bases:

>100_bases
GCTCTTCAACGCCTCCTTAAGTTCCTCCATTATCCTTATATCGTCCAATGTTGATACATCACCTGGATTCTCGTTAGCTA
GGATAGCCTTTAGTAGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterio-Opsin Activator; HTH Domain-Containing Protein

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MINLIKHVDIVVSHEDCWTSHMPFTAYTINLEVYPHKNYLRSRILIDSMENKVISNLMKTHRSVIKVMKVDRFKGGTYVD
FLNKYKGSIAGVLYDKEVLILGNLIEGKDEKWSFVTSSKNLREILTEIESLGKVKRVETTDFNPILYPNLTEWEKKVLTV
SYSYGYLDYPRRATADELAKLLGISKVTFLYHLRNAQRKLIAFSIKNILA

Sequences:

>Translated_210_residues
MINLIKHVDIVVSHEDCWTSHMPFTAYTINLEVYPHKNYLRSRILIDSMENKVISNLMKTHRSVIKVMKVDRFKGGTYVD
FLNKYKGSIAGVLYDKEVLILGNLIEGKDEKWSFVTSSKNLREILTEIESLGKVKRVETTDFNPILYPNLTEWEKKVLTV
SYSYGYLDYPRRATADELAKLLGISKVTFLYHLRNAQRKLIAFSIKNILA
>Mature_210_residues
MINLIKHVDIVVSHEDCWTSHMPFTAYTINLEVYPHKNYLRSRILIDSMENKVISNLMKTHRSVIKVMKVDRFKGGTYVD
FLNKYKGSIAGVLYDKEVLILGNLIEGKDEKWSFVTSSKNLREILTEIESLGKVKRVETTDFNPILYPNLTEWEKKVLTV
SYSYGYLDYPRRATADELAKLLGISKVTFLYHLRNAQRKLIAFSIKNILA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24354; Mature: 24354

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLIKHVDIVVSHEDCWTSHMPFTAYTINLEVYPHKNYLRSRILIDSMENKVISNLMKT
CCCHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
HRSVIKVMKVDRFKGGTYVDFLNKYKGSIAGVLYDKEVLILGNLIEGKDEKWSFVTSSKN
HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCEEEEECCHH
LREILTEIESLGKVKRVETTDFNPILYPNLTEWEKKVLTVSYSYGYLDYPRRATADELAK
HHHHHHHHHHHCCEEECCCCCCCCEECCCCCHHCCEEEEEEECCCCCCCCCCCCHHHHHH
LLGISKVTFLYHLRNAQRKLIAFSIKNILA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINLIKHVDIVVSHEDCWTSHMPFTAYTINLEVYPHKNYLRSRILIDSMENKVISNLMKT
CCCHHEEEEEEEECCCCCCCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH
HRSVIKVMKVDRFKGGTYVDFLNKYKGSIAGVLYDKEVLILGNLIEGKDEKWSFVTSSKN
HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCEEEEECCHH
LREILTEIESLGKVKRVETTDFNPILYPNLTEWEKKVLTVSYSYGYLDYPRRATADELAK
HHHHHHHHHHHCCEEECCCCCCCCEECCCCCHHCCEEEEEEECCCCCCCCCCCCHHHHHH
LLGISKVTFLYHLRNAQRKLIAFSIKNILA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA