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The map label for this gene is ydcM [C]

Identifier: 15898495

GI number: 15898495

Start: 1535273

End: 1535605

Strand: Direct

Name: ydcM [C]

Synonym: SSO1681

Alternate gene names: 15898495

Gene position: 1535273-1535605 (Clockwise)

Preceding gene: 15898494

Following gene: 15898496

Centisome position: 51.31

GC content: 43.84

Gene sequence:

>333_bases
GTGATAGTACACAGGGACTTCCCTCTAGATAAGGTGAAGAGAATCATAGTGAAGTTAGAGCCGTCTGGGAGAATATACAT
CATTTTCGTGATTGATTACGAGTTCAAGGCCCTCCCATTTACTGGAAAAGTTGTCGCGATCGACGTGGGAATTGAGAAAC
TCGTAACTACCTCCGATGGTCAGTATTTCCCTAACCTGAAGCCTTTTGAGAGGGCCTTAACCAAGGTAAGGGAACTTCAT
AGGTCTCTTTCGAGGAAGAGATTTCTCTCTCATAACTGGTTCAAAGCTAAGGTTAAGTTGGCTAGGGCTTATGAGCACTA
CTACTTCCAGTAA

Upstream 100 bases:

>100_bases
TCATCTAGGAGTCTTCAACGTTAGTGCTTTCAGAAAGTCTATAGCTTTAGACAAAGGATATACCACTAGATCATAGTCTA
AGAACTTTTCCAAAATACTA

Downstream 100 bases:

>100_bases
GTCCATAGTCTAGTATTATTTTATAAAATATTATTGAAAATAATTCCATTGTATTGGCCTTAATGAATACATAAAACTTA
TCAACTTGATTAATTGATTC

Product: partial transposase in ISC1316

Products: NA

Alternate protein names: Transposase ISC; Second ORF In Transposon ISC; Transposon; Transposase OrfB; Partial Transposase In ISC

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MIVHRDFPLDKVKRIIVKLEPSGRIYIIFVIDYEFKALPFTGKVVAIDVGIEKLVTTSDGQYFPNLKPFERALTKVRELH
RSLSRKRFLSHNWFKAKVKLARAYEHYYFQ

Sequences:

>Translated_110_residues
MIVHRDFPLDKVKRIIVKLEPSGRIYIIFVIDYEFKALPFTGKVVAIDVGIEKLVTTSDGQYFPNLKPFERALTKVRELH
RSLSRKRFLSHNWFKAKVKLARAYEHYYFQ
>Mature_110_residues
MIVHRDFPLDKVKRIIVKLEPSGRIYIIFVIDYEFKALPFTGKVVAIDVGIEKLVTTSDGQYFPNLKPFERALTKVRELH
RSLSRKRFLSHNWFKAKVKLARAYEHYYFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13088; Mature: 13088

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVHRDFPLDKVKRIIVKLEPSGRIYIIFVIDYEFKALPFTGKVVAIDVGIEKLVTTSDG
CCCCCCCCHHHHHEEEEEECCCCCEEEEEEEECCEEECCCCCCEEEEECCCEEEEECCCC
QYFPNLKPFERALTKVRELHRSLSRKRFLSHNWFKAKVKLARAYEHYYFQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIVHRDFPLDKVKRIIVKLEPSGRIYIIFVIDYEFKALPFTGKVVAIDVGIEKLVTTSDG
CCCCCCCCHHHHHEEEEEECCCCCEEEEEEEECCEEECCCCCCEEEEECCCEEEEECCCC
QYFPNLKPFERALTKVRELHRSLSRKRFLSHNWFKAKVKLARAYEHYYFQ
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA