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The map label for this gene is 15898345

Identifier: 15898345

GI number: 15898345

Start: 1371297

End: 1371623

Strand: Reverse

Name: 15898345

Synonym: SSO1518

Alternate gene names: NA

Gene position: 1371623-1371297 (Counterclockwise)

Preceding gene: 15898346

Following gene: 15898344

Centisome position: 45.84

GC content: 38.53

Gene sequence:

>327_bases
ATGCAAGATTTGGTTCAAGCTTATAAGGAAGAGAAGAACGCGAGAATTAAGGAGAGGATTCTTGCGGTGAAGCTGCACGT
AGTTGATGGTAAATCGGAGAAAGAAGTTTCGAAAATGCTTAACAAGGGCTATTCCACGATAAAATTGTGGATTGGCAAGT
ACAAGAAAGAAGGTCTTGATGGACTAAAGGACAAGCCCAGATCAGGAAGACCCAGAAAAGTAGAAGAGGAAAAGATAAAA
CAAATTCTGGAAGATAAGCCCCAAAAATACGGAATACAACAAGAATATTGGACAATGAAAACACTCAAGATAGCACTACA
AGAATAA

Upstream 100 bases:

>100_bases
GATAAATAAAGTTAAGGGAAAATATTAGCAGAGAGATTTGGAGAGCAGTATACGGTAGTGTTTCCGAAAAGTTTATAGAT
TAGTATTACCAGATTGAACT

Downstream 100 bases:

>100_bases
GGAATAGAATACAAGAAATCCAGACTATACGAACTAGTCCACGAACTAGGATACAACCTAGTAAAACCCAGACCTACCAA
CATCCAAGCAGAAAAGGACA

Product: partial transposase from ISC1048

Products: NA

Alternate protein names: Transposase; Transposase ISC

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQE

Sequences:

>Translated_108_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQE
>Mature_108_residues
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLDGLKDKPRSGRPRKVEEEKIK
QILEDKPQKYGIQQEYWTMKTLKIALQE

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12718; Mature: 12718

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQDLVQAYKEEKNARIKERILAVKLHVVDGKSEKEVSKMLNKGYSTIKLWIGKYKKEGLD
CHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCC
GLKDKPRSGRPRKVEEEKIKQILEDKPQKYGIQQEYWTMKTLKIALQE
CCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA