Click here to switch to the map view.

The map label for this gene is 15898344

Identifier: 15898344

GI number: 15898344

Start: 1370921

End: 1371163

Strand: Reverse

Name: 15898344

Synonym: SSO8278

Alternate gene names: NA

Gene position: 1371163-1370921 (Counterclockwise)

Preceding gene: 15898345

Following gene: 15898343

Centisome position: 45.82

GC content: 41.98

Gene sequence:

>243_bases
TTGGAAAGAAAGGCACTGTTCTTTCTAGACGAGTGTAGGACAGTAATTAGCACGTCAATTAAGAAGGTTCTAGCTAAGGT
TGGCAGTAAGCCCGTAATGCGCGTCAATATAGGTTTTTCCTCAATCTATGTTATTCTAGCTATAAACGCTTGGACCGGCG
AAGTAGTGGTTTCTCTTGCTAAAAGGCCTAACTCTGAATCCGTTAAGTATTTCTTGAGGTACTTTAAGAGGCGTGTGGGT
TAG

Upstream 100 bases:

>100_bases
CTAGTCCACGAACTAGGATACAACCTAGTAAAACCCAGACCTACCAACATCCAAGCAGAAAAGGACAAGTGGGAAGATTT
TAAAAAAAAAAATAAAGAAA

Downstream 100 bases:

>100_bases
GGTTTACATGGTCATGGATAATTACTCTCCTCACAAGACTAAGGGTACGCTTGAGGTTTGTCGCAGGAAGGGTATTCATC
CCGTGTTTACTCCTCCTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase ISC; ORF2 In Transposon ISC

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG

Sequences:

>Translated_80_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG
>Mature_80_residues
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLAKRPNSESVKYFLRYFKRRVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9114; Mature: 9114

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEEEEEECCCHHHHHHHHH
KRPNSESVKYFLRYFKRRVG
CCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERKALFFLDECRTVISTSIKKVLAKVGSKPVMRVNIGFSSIYVILAINAWTGEVVVSLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEEEEEECCCHHHHHHHHH
KRPNSESVKYFLRYFKRRVG
CCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA