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The map label for this gene is 15898327

Identifier: 15898327

GI number: 15898327

Start: 1350854

End: 1351189

Strand: Direct

Name: 15898327

Synonym: SSO1497

Alternate gene names: NA

Gene position: 1350854-1351189 (Clockwise)

Preceding gene: 15898326

Following gene: 15898328

Centisome position: 45.15

GC content: 37.2

Gene sequence:

>336_bases
ATGGGAATTATTAGAAAAAGAAAAGTAATATTATACGCAAGAGTACCATCTTCCACACAAAAAGACGAACTAGTAAACCA
AGTAAAATATCTAGAGGAACAAGTCAAAGAATATGATCAAGTAATTAGTGACATAGGTTCCGGGTTAAACATGAAGAGAA
AGGGGTTCTTGAAGCTGTTGAGAATGATATTAAACAACGAAGTATCACGCGTAGTTGTTGCCTACCCAGACAGACTTGTT
AGGCTTCGAAATCTTAGAGGAAGTGTGCAAAGCACACAACTGCGAAATAGTAGTACTAAACCAGAAGGACAAAACACCAG
AACAGGAGATGATTGA

Upstream 100 bases:

>100_bases
CTACCGCACACTACAGAACTACGTAAAGAAAGGATACATAAAACCAATTATACTACAGAGCGGAAAACAAAGATTCAGAG
AAGAAGACATAGAGAGACTA

Downstream 100 bases:

>100_bases
AGACCTAATCTCCATTCTGTTCTCATTCAGCGGAAAACTGTATGGCATGAGAAGTCACAAGTACGAAAAGGTGAAGAAAT
GTGTTGAAGAACTTAAGAAT

Product: transposon ISC1778 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MGIIRKRKVILYARVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLV
RLRNLRGSVQSTQLRNSSTKPEGQNTRTGDD

Sequences:

>Translated_111_residues
MGIIRKRKVILYARVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLV
RLRNLRGSVQSTQLRNSSTKPEGQNTRTGDD
>Mature_110_residues
GIIRKRKVILYARVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKGFLKLLRMILNNEVSRVVVAYPDRLVR
LRNLRGSVQSTQLRNSSTKPEGQNTRTGDD

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 12749; Mature: 12618

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIRKRKVILYARVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKGFLKLL
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RMILNNEVSRVVVAYPDRLVRLRNLRGSVQSTQLRNSSTKPEGQNTRTGDD
HHHHCCCHHEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GIIRKRKVILYARVPSSTQKDELVNQVKYLEEQVKEYDQVISDIGSGLNMKRKGFLKLL
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RMILNNEVSRVVVAYPDRLVRLRNLRGSVQSTQLRNSSTKPEGQNTRTGDD
HHHHCCCHHEEEECCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]