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The map label for this gene is 15898313

Identifier: 15898313

GI number: 15898313

Start: 1340550

End: 1340996

Strand: Direct

Name: 15898313

Synonym: SSO1483

Alternate gene names: NA

Gene position: 1340550-1340996 (Clockwise)

Preceding gene: 15898307

Following gene: 15898314

Centisome position: 44.8

GC content: 35.57

Gene sequence:

>447_bases
TTGGAAGAGAAGTTACAGTGGAGGAGATTGAGGAAATCGCAAGTAAGGCCTTTAAAGATGATAGTAGTTGATACGAATGT
CCTAATTTACGCCACTCTTGAAGACAGCGAATTTCATACTCAAAGTCTAGAGATAATTGAGGGATCAGACATAATAGTTC
CCCAAATTGTAGTCTTCGAATACATAAAGGTACTATCTGAAATTGTACAGAACTTAGATTTCATAAAAACAAAAATCTCA
GAGTTAAACAATTTTGTCGTTGTTTGCGAAGACCTTAATACTATAGCACTAGCGTTGAGACTATTAGCAGAGTTAAAACT
TTCACTGAAAGACATTAACGATATGATAATCTTAACCGCAGCAATTAAGACAAACAGCTCCATAGCCACATTTGATCAGA
AGCTTAGAAAGATTGCAGACAAGAAGGGAGTTAAAGTTTTGCCTTGA

Upstream 100 bases:

>100_bases
AAAGTGCTAGGAATAAAAGAGGGAGACTATATTGAGTTCGCAATAGAAAACGGTAAGGTCATGATAAAACCTGTTAGAAA
AGTTTGGTCAACTATTAGAC

Downstream 100 bases:

>100_bases
TTATTTTTTAAAGTAACAGTCATTAAGCTTTGTGGGATTGTTGAATATTCATAAAGGGTTATGAGATGTCAATCTGAATT
GTGCATCTTATCATTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MEEKLQWRRLRKSQVRPLKMIVVDTNVLIYATLEDSEFHTQSLEIIEGSDIIVPQIVVFEYIKVLSEIVQNLDFIKTKIS
ELNNFVVVCEDLNTIALALRLLAELKLSLKDINDMIILTAAIKTNSSIATFDQKLRKIADKKGVKVLP

Sequences:

>Translated_148_residues
MEEKLQWRRLRKSQVRPLKMIVVDTNVLIYATLEDSEFHTQSLEIIEGSDIIVPQIVVFEYIKVLSEIVQNLDFIKTKIS
ELNNFVVVCEDLNTIALALRLLAELKLSLKDINDMIILTAAIKTNSSIATFDQKLRKIADKKGVKVLP
>Mature_148_residues
MEEKLQWRRLRKSQVRPLKMIVVDTNVLIYATLEDSEFHTQSLEIIEGSDIIVPQIVVFEYIKVLSEIVQNLDFIKTKIS
ELNNFVVVCEDLNTIALALRLLAELKLSLKDINDMIILTAAIKTNSSIATFDQKLRKIADKKGVKVLP

Specific function: Unknown

COG id: COG1848

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16910; Mature: 16910

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEKLQWRRLRKSQVRPLKMIVVDTNVLIYATLEDSEFHTQSLEIIEGSDIIVPQIVVFE
CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCHHHEEEECCCCCCHHHHHHHH
YIKVLSEIVQNLDFIKTKISELNNFVVVCEDLNTIALALRLLAELKLSLKDINDMIILTA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
AIKTNSSIATFDQKLRKIADKKGVKVLP
EECCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEEKLQWRRLRKSQVRPLKMIVVDTNVLIYATLEDSEFHTQSLEIIEGSDIIVPQIVVFE
CCCHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCCCHHHEEEECCCCCCHHHHHHHH
YIKVLSEIVQNLDFIKTKISELNNFVVVCEDLNTIALALRLLAELKLSLKDINDMIILTA
HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
AIKTNSSIATFDQKLRKIADKKGVKVLP
EECCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA