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The map label for this gene is 15898256

Identifier: 15898256

GI number: 15898256

Start: 1269463

End: 1269717

Strand: Reverse

Name: 15898256

Synonym: SSO8002

Alternate gene names: NA

Gene position: 1269717-1269463 (Counterclockwise)

Preceding gene: 15898258

Following gene: 15898255

Centisome position: 42.43

GC content: 39.61

Gene sequence:

>255_bases
ATGCAAACCATACAAGTATCCAAAACGGAGCTGAAGTCCCTCGCTATAACTTTAGCAACAAACAATATTAACGTTATCTC
TCAAGATCTAGACTTGGAAATAGTGAAAGCAGCACCATCCTTGCTAACCGGAAACAGAGGAAAATACTACTTGAAGGTAG
TAAGACAAGGCGAGAAAGTAATTAGTAAAGGTCAGAGAACCTTCAAGTTCTACCCAATCTACAGAGAAGTAAAGGGAGAG
ATCAACGTAGTGTAG

Upstream 100 bases:

>100_bases
AAGAGTAATACCATTTGTCTAGTATTATCAATGAGAGAGAGTAGGTGGAAGGACGAGATGAACAAGAAAAGGTTAAAGCG
AGGGACTCCATAACTCCGTT

Downstream 100 bases:

>100_bases
ATGAGACCGGATTAACCGTGGGAGAAAAGGAACAAGAAAAAGCAGAGGGCTTTCTACTCTACAACTGGAAGAGAAAAGGA
ATAAAGATGAGATCCTTGGA

Product: transposon ISC1439 Orf1

Products: NA

Alternate protein names: ORF1 In Transposon ISC; Transposon

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MQTIQVSKTELKSLAITLATNNINVISQDLDLEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKGE
INVV

Sequences:

>Translated_84_residues
MQTIQVSKTELKSLAITLATNNINVISQDLDLEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKGE
INVV
>Mature_84_residues
MQTIQVSKTELKSLAITLATNNINVISQDLDLEIVKAAPSLLTGNRGKYYLKVVRQGEKVISKGQRTFKFYPIYREVKGE
INVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9470; Mature: 9470

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTIQVSKTELKSLAITLATNNINVISQDLDLEIVKAAPSLLTGNRGKYYLKVVRQGEKV
CCCEECCHHHHEEEEEEEEECCCEEEECCCCEEEEECCCHHEECCCCEEEEEEECCCHHH
ISKGQRTFKFYPIYREVKGEINVV
HHCCCCEEEEEEEHEECCCEEECC
>Mature Secondary Structure
MQTIQVSKTELKSLAITLATNNINVISQDLDLEIVKAAPSLLTGNRGKYYLKVVRQGEKV
CCCEECCHHHHEEEEEEEEECCCEEEECCCCEEEEECCCHHEECCCCEEEEEEECCCHHH
ISKGQRTFKFYPIYREVKGEINVV
HHCCCCEEEEEEEHEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA