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The map label for this gene is insQ [H]

Identifier: 15898207

GI number: 15898207

Start: 1202740

End: 1203462

Strand: Direct

Name: insQ [H]

Synonym: SSO1368

Alternate gene names: 15898207

Gene position: 1202740-1203462 (Clockwise)

Preceding gene: 15898205

Following gene: 15898208

Centisome position: 40.2

GC content: 43.98

Gene sequence:

>723_bases
TTGGTGAAACACCACTGGAGAGTGGTAGTGAAGCTAACAAGATCTGAGAGGATATACATCACTTTCGTAGTTGATCACGA
ATTCCCCAAGTTACCTAACACTGGTAAGGTAGTGGCGATAGATGTTGGTGTAGAAAAGTTGTTAGTAACGTCAGATGGTG
AGTATTTTCCTAATTTGAGACCTTACGAGAAAGCGTTATGGAAAGTGAAGCATCTACACAGAGAACTTTCAAGGAAGAAG
TTCCTCTCTCATAACTGGTTTAAGGCTAAGGTTAAGCTTGCTAGGGCTTATGAGCATTTGAAGAATCTAAGAACGGATCT
TTACATGAAGTTGGGTAAGTGGTTTGCTGAGCATTATGACGTTGTAGTCATGGAGGACATTCACGCTAAACAACTTGTGG
GTAAGTCCTTGAGGTCTCTGAGAAGGAGGCTGAGTGATGTGGGATTTGGTGAGTTGAGGGATGTGCTGAAGTATCAGCTG
GAAAAATACGGAAAGAAACTCATCCTAGTTAATCCTGCATACACTTCCAAAACTTGTGCTAGGTGCGGGTATGTGAAAAA
TGACTTGTCTCTATCTGATCGTGTTTTCGTTTGTCCCAACTGTGGTTGGATTGCAGATCGTGACTATAATGCTTCTCTTA
ACATCTTACGTGGATCGGGGTCGGAGCGACCCTTAGTGTGGAGCTCCGCCCTCTACCAGTACTCTGGCAAGGTGGGGCTG
TGA

Upstream 100 bases:

>100_bases
AATATGAAAATTTTTTGCTTCTTGTGTTGAAATAAGCCGATTTTCTAACTTCGCTCTGATATTTTTCTCTTCCATAGAAA
TTGTATCATTTTGAGTAAAA

Downstream 100 bases:

>100_bases
AGCAGGAAGCTCCCTCATTTATGAGGGGGTAGCTCACTTAATACAAGCCTTGAGATAGAAAAACCTAAACTATAGTAGTA
CATCAGTGTTGATAACAGAT

Product: second ORF in transposon ISC1316

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MVKHHWRVVVKLTRSERIYITFVVDHEFPKLPNTGKVVAIDVGVEKLLVTSDGEYFPNLRPYEKALWKVKHLHRELSRKK
FLSHNWFKAKVKLARAYEHLKNLRTDLYMKLGKWFAEHYDVVVMEDIHAKQLVGKSLRSLRRRLSDVGFGELRDVLKYQL
EKYGKKLILVNPAYTSKTCARCGYVKNDLSLSDRVFVCPNCGWIADRDYNASLNILRGSGSERPLVWSSALYQYSGKVGL

Sequences:

>Translated_240_residues
MVKHHWRVVVKLTRSERIYITFVVDHEFPKLPNTGKVVAIDVGVEKLLVTSDGEYFPNLRPYEKALWKVKHLHRELSRKK
FLSHNWFKAKVKLARAYEHLKNLRTDLYMKLGKWFAEHYDVVVMEDIHAKQLVGKSLRSLRRRLSDVGFGELRDVLKYQL
EKYGKKLILVNPAYTSKTCARCGYVKNDLSLSDRVFVCPNCGWIADRDYNASLNILRGSGSERPLVWSSALYQYSGKVGL
>Mature_240_residues
MVKHHWRVVVKLTRSERIYITFVVDHEFPKLPNTGKVVAIDVGVEKLLVTSDGEYFPNLRPYEKALWKVKHLHRELSRKK
FLSHNWFKAKVKLARAYEHLKNLRTDLYMKLGKWFAEHYDVVVMEDIHAKQLVGKSLRSLRRRLSDVGFGELRDVLKYQL
EKYGKKLILVNPAYTSKTCARCGYVKNDLSLSDRVFVCPNCGWIADRDYNASLNILRGSGSERPLVWSSALYQYSGKVGL

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=213, Percent_Identity=32.8638497652582, Blast_Score=115, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 27930; Mature: 27930

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHHWRVVVKLTRSERIYITFVVDHEFPKLPNTGKVVAIDVGVEKLLVTSDGEYFPNLR
CCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCC
PYEKALWKVKHLHRELSRKKFLSHNWFKAKVKLARAYEHLKNLRTDLYMKLGKWFAEHYD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VVVMEDIHAKQLVGKSLRSLRRRLSDVGFGELRDVLKYQLEKYGKKLILVNPAYTSKTCA
EEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH
RCGYVKNDLSLSDRVFVCPNCGWIADRDYNASLNILRGSGSERPLVWSSALYQYSGKVGL
HCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCCCCCCEEHHHHHHHCCCCCCC
>Mature Secondary Structure
MVKHHWRVVVKLTRSERIYITFVVDHEFPKLPNTGKVVAIDVGVEKLLVTSDGEYFPNLR
CCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCC
PYEKALWKVKHLHRELSRKKFLSHNWFKAKVKLARAYEHLKNLRTDLYMKLGKWFAEHYD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VVVMEDIHAKQLVGKSLRSLRRRLSDVGFGELRDVLKYQLEKYGKKLILVNPAYTSKTCA
EEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHH
RCGYVKNDLSLSDRVFVCPNCGWIADRDYNASLNILRGSGSERPLVWSSALYQYSGKVGL
HCCCCCCCCCCCCCEEECCCCCEEECCCCCCEEEEEECCCCCCCEEHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]