| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is ybhF [C]
Identifier: 15898109
GI number: 15898109
Start: 1090286
End: 1091146
Strand: Reverse
Name: ybhF [C]
Synonym: SSO1266
Alternate gene names: 15898109
Gene position: 1091146-1090286 (Counterclockwise)
Preceding gene: 15898110
Following gene: 15898108
Centisome position: 36.47
GC content: 34.96
Gene sequence:
>861_bases ATGACTATTGAAGTTGAGGATTTAAGGAAAAAGTTTGCTGGTAAAGAAGTACTTAAGGGCGTTAGTTTTAAACTCAGAAG TGGATCAATAACTGGTTTTATTGGACCAAATGGTGCTGGAAAAACGACTACAATAAAAATACTTTCTGGGTTGTTAAGAA AGGACGGAGGGTTTGTTAAAGTATTTGGTGAAGATCCTTGGGATAACCCAAAGGTCATGGAGAGAATTTCAGTTATTTTC ACTAACTTAATTCATCCTCAAGAGAACACAGTAGGGGAATATTTGATGGATCTGGGAAATGTTTATGGGAAAAAGAGGGA GATAATTAACTATCTAATTGAGGAATTTAAGTTAACTCCTCACCTTAATAAGAGGCTTTATCAACTATCCTCTGGTTTAG CCCAAAGAGTTCAATTAGTAGCTGCATTAATAAAGGATGTTGAGTTGATAATAGCAGACGAACCCACTGCCAATCTAGAT CCCTCCTTTAGAATAGAGTTTTATGAGGTAGTGAAGGAGTTGAATAGGAAAAATGGTGTAACGTTTTTCATTTCATCTCA TATACTCTCAGAGCTCGAAAAAGTTATAACTGATGTAATATTTATTAATGACGGAAGAATTACATACTCAGGCAGGATGA ACAAGGCTTTAAGCGATACCGAAGAGGAAGAAATTTACGTAATGGTAGACGATACTGATAGAGCTTTGAAATTATTGGGA GGAATACTTGAAGGACCTTATATAAAGGTTAAAGGTAAGTTAAGGGAGATAGTAGATAAGTTAGATGATAATGGAATCGA GATAATAAGTATTAGGAGGTTCTCACTAGATGATGCCTTCAAGAAGTTTTCAAATATTTAG
Upstream 100 bases:
>100_bases GTTAGGAAAGGGTTGCCGATAGATACTCCTCCAGGGTTAGTGAAAGCTGTGATAGTTTAAAATAAATAATAAATTATCCT TTTTCTTCTATTTATATTAC
Downstream 100 bases:
>100_bases ACTCATATTTAAGGAGAGATATAGGCAACCTACGCTTGAGTTAGTAATCCCAACAATGTTAGTTTCAAACGTTTTCATTA GTGCGTTTTACGCTAGGGGA
Product: ABC transporter, ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTIEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVKVFGEDPWDNPKVMERISVIF TNLIHPQENTVGEYLMDLGNVYGKKREIINYLIEEFKLTPHLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLD PSFRIEFYEVVKELNRKNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRALKLLG GILEGPYIKVKGKLREIVDKLDDNGIEIISIRRFSLDDAFKKFSNI
Sequences:
>Translated_286_residues MTIEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVKVFGEDPWDNPKVMERISVIF TNLIHPQENTVGEYLMDLGNVYGKKREIINYLIEEFKLTPHLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLD PSFRIEFYEVVKELNRKNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRALKLLG GILEGPYIKVKGKLREIVDKLDDNGIEIISIRRFSLDDAFKKFSNI >Mature_285_residues TIEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVKVFGEDPWDNPKVMERISVIFT NLIHPQENTVGEYLMDLGNVYGKKREIINYLIEEFKLTPHLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDP SFRIEFYEVVKELNRKNGVTFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRALKLLGG ILEGPYIKVKGKLREIVDKLDDNGIEIISIRRFSLDDAFKKFSNI
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=222, Percent_Identity=31.0810810810811, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI27881501, Length=216, Percent_Identity=28.2407407407407, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI30795238, Length=216, Percent_Identity=28.2407407407407, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI105990541, Length=220, Percent_Identity=29.0909090909091, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI21536376, Length=209, Percent_Identity=28.7081339712919, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI27436953, Length=229, Percent_Identity=25.3275109170306, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI45446740, Length=208, Percent_Identity=28.8461538461538, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI47078218, Length=208, Percent_Identity=28.8461538461538, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI27477115, Length=229, Percent_Identity=29.2576419213974, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI6005701, Length=228, Percent_Identity=26.3157894736842, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI31657092, Length=210, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI27262624, Length=214, Percent_Identity=27.1028037383178, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI27262626, Length=214, Percent_Identity=27.1028037383178, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI116734710, Length=224, Percent_Identity=25, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87081782, Length=261, Percent_Identity=31.0344827586207, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1786319, Length=293, Percent_Identity=27.9863481228669, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI48994943, Length=218, Percent_Identity=31.1926605504587, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=27.027027027027, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789593, Length=242, Percent_Identity=28.099173553719, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=26.7605633802817, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=29.6803652968037, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=26.9709543568465, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788225, Length=237, Percent_Identity=27.4261603375527, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=28.0193236714976, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787712, Length=210, Percent_Identity=25.2380952380952, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1790544, Length=233, Percent_Identity=26.6094420600858, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=27.7777777777778, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI87081834, Length=224, Percent_Identity=29.4642857142857, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786872, Length=253, Percent_Identity=29.6442687747036, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1788506, Length=222, Percent_Identity=26.1261261261261, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87081709, Length=213, Percent_Identity=26.2910798122066, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=22.7906976744186, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1789962, Length=233, Percent_Identity=24.8927038626609, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1787547, Length=245, Percent_Identity=26.1224489795918, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787500, Length=283, Percent_Identity=25.4416961130742, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788450, Length=216, Percent_Identity=24.537037037037, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787089, Length=224, Percent_Identity=23.6607142857143, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=25.4385964912281, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790190, Length=287, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789873, Length=215, Percent_Identity=26.046511627907, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788210, Length=207, Percent_Identity=29.951690821256, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=25.1207729468599, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=25, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1789991, Length=218, Percent_Identity=27.5229357798165, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786398, Length=201, Percent_Identity=28.3582089552239, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787759, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788002, Length=220, Percent_Identity=25, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082267, Length=215, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786345, Length=236, Percent_Identity=22.4576271186441, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1788540, Length=180, Percent_Identity=31.1111111111111, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789963, Length=265, Percent_Identity=24.1509433962264, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789891, Length=212, Percent_Identity=29.2452830188679, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48995001, Length=225, Percent_Identity=25.7777777777778, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787758, Length=241, Percent_Identity=22.4066390041494, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI145693107, Length=205, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI48994997, Length=243, Percent_Identity=23.0452674897119, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788644, Length=230, Percent_Identity=29.1304347826087, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790525, Length=228, Percent_Identity=28.5087719298246, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI87082268, Length=219, Percent_Identity=24.6575342465753, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI2367384, Length=219, Percent_Identity=26.4840182648402, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1787182, Length=168, Percent_Identity=29.7619047619048, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=26.1306532663317, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=27.7511961722488, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=27.7511961722488, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=27.7511961722488, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115533608, Length=213, Percent_Identity=29.5774647887324, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17510237, Length=211, Percent_Identity=24.1706161137441, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24666092, Length=224, Percent_Identity=30.8035714285714, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24582014, Length=203, Percent_Identity=29.5566502463054, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24582012, Length=203, Percent_Identity=29.5566502463054, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24643674, Length=220, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI221512771, Length=215, Percent_Identity=23.7209302325581, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648314, Length=222, Percent_Identity=28.8288288288288, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24650853, Length=193, Percent_Identity=27.4611398963731, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650855, Length=193, Percent_Identity=27.4611398963731, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362751, Length=193, Percent_Identity=27.4611398963731, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28573573, Length=216, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573571, Length=216, Percent_Identity=23.6111111111111, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221500365, Length=207, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI116007184, Length=207, Percent_Identity=26.0869565217391, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI85725262, Length=184, Percent_Identity=28.804347826087, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI85724864, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580555, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85816269, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580553, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI19920532, Length=234, Percent_Identity=26.0683760683761, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24580930, Length=234, Percent_Identity=26.0683760683761, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32336; Mature: 32205
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVK CCCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE VFGEDPWDNPKVMERISVIFTNLIHPQENTVGEYLMDLGNVYGKKREIINYLIEEFKLTP EECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDPSFRIEFYEVVKELNRKNGV HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE TFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRALKLLG EEEHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHHCCCCCCEEEEEECCCHHHHHHHH GILEGPYIKVKGKLREIVDKLDDNGIEIISIRRFSLDDAFKKFSNI HHHCCCEEEECHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCC >Mature Secondary Structure TIEVEDLRKKFAGKEVLKGVSFKLRSGSITGFIGPNGAGKTTTIKILSGLLRKDGGFVK CCCHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEE VFGEDPWDNPKVMERISVIFTNLIHPQENTVGEYLMDLGNVYGKKREIINYLIEEFKLTP EECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HLNKRLYQLSSGLAQRVQLVAALIKDVELIIADEPTANLDPSFRIEFYEVVKELNRKNGV HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE TFFISSHILSELEKVITDVIFINDGRITYSGRMNKALSDTEEEEIYVMVDDTDRALKLLG EEEHHHHHHHHHHHHHHHEEEEECCEEEECCCCCHHHCCCCCCEEEEEECCCHHHHHHHH GILEGPYIKVKGKLREIVDKLDDNGIEIISIRRFSLDDAFKKFSNI HHHCCCEEEECHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]