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The map label for this gene is rps27e

Identifier: 15897918

GI number: 15897918

Start: 908102

End: 908302

Strand: Direct

Name: rps27e

Synonym: SSO7114

Alternate gene names: 15897918

Gene position: 908102-908302 (Clockwise)

Preceding gene: 15897917

Following gene: 15897919

Centisome position: 30.35

GC content: 36.32

Gene sequence:

>201_bases
GTGATGAGAAAACTAAGGGTCCTAATTCCAGAGCCAAAGAGTAGATTCCTTAGAGTAAAGTGTCCAAATTGTGGTAATGA
ACAAACAATATTTAGTCATGCTACATTTCCAGTTAGATGTCTAAGTTGTGGGACTGAGTTAGTATACTCTATGGGCGGTA
AAGCAAAAATAGTTGGAGAAGTAGTTAGAATAATGGGTTAA

Upstream 100 bases:

>100_bases
CAAAGAAGCAAACGTTAGTTTTGAAGTGTTCTAAGTGTGGTTACACTATAGTAAAAGAGGGAATTAGAGTAAAGAAGTTA
GAATTAGTAGAGGTGGCTAA

Downstream 100 bases:

>100_bases
AGATGATTTACAGTAGAAGCAAACTACCCTCAGAAGGAGAAATTTTAATTGCAACTGTAAAACAAGTTTTTGATTATGGT
AGTTATGTTTCTTTAGACGA

Product: 30S ribosomal protein S27e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MMRKLRVLIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKIVGEVVRIMG

Sequences:

>Translated_66_residues
MMRKLRVLIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKIVGEVVRIMG
>Mature_66_residues
MMRKLRVLIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKIVGEVVRIMG

Specific function: Unknown

COG id: COG2051

COG function: function code J; Ribosomal protein S27E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27_SULSO (Q97Z80)

Other databases:

- EMBL:   AE006641
- PIR:   B90257
- RefSeq:   NP_342523.1
- ProteinModelPortal:   Q97Z80
- SMR:   Q97Z80
- GeneID:   1454092
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO7114
- NMPDR:   fig|273057.1.peg.946
- HOGENOM:   HBG392194
- OMA:   CIDCGNE
- PhylomeDB:   Q97Z80
- ProtClustDB:   PRK00415
- BioCyc:   SSOL273057:SSO7114-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00371
- InterPro:   IPR000592
- InterPro:   IPR022959
- InterPro:   IPR011332
- PANTHER:   PTHR11594

Pfam domain/function: PF01667 Ribosomal_S27e; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 7385; Mature: 7385

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01168 RIBOSOMAL_S27E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
12.1 %Cys+Met (Translated Protein)
6.1 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
12.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKLRVLIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKIVGE
CCCCEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHH
VVRIMG
HHHHCC
>Mature Secondary Structure
MMRKLRVLIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKIVGE
CCCCEEEECCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHH
VVRIMG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726