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The map label for this gene is rpl44e [H]

Identifier: 15897917

GI number: 15897917

Start: 907818

End: 908105

Strand: Direct

Name: rpl44e [H]

Synonym: SSO7111

Alternate gene names: 15897917

Gene position: 907818-908105 (Clockwise)

Preceding gene: 15897916

Following gene: 15897918

Centisome position: 30.34

GC content: 36.11

Gene sequence:

>288_bases
ATGAAAGTCCCTAAGGTCATCAGCACATATTGTCCAAAGTGTAAGACTCATACAGATCACTCTGTATCACTATACAAGAG
CGGTAAGAGAAGAAATCTCGCTGAAGGACAGAGAAGATATGAGAGAAAGAATATTGGATATGGAAGTAAAAGAAAACCAG
AACAGAAGAGATTTGCAAAAGTTACAAAGAAGCAAACGTTAGTTTTGAAGTGTTCTAAGTGTGGTTACACTATAGTAAAA
GAGGGAATTAGAGTAAAGAAGTTAGAATTAGTAGAGGTGGCTAAGTGA

Upstream 100 bases:

>100_bases
TTAATGAGGGAGATGTTTTGGTTTTACCTATGAGAGAAGCCTTGCCATTAATAATAGCAAGTTATTTAACTCCCTATAAG
ATAGATATTGAAGAACAATT

Downstream 100 bases:

>100_bases
TGAGAAAACTAAGGGTCCTAATTCCAGAGCCAAAGAGTAGATTCCTTAGAGTAAAGTGTCCAAATTGTGGTAATGAACAA
ACAATATTTAGTCATGCTAC

Product: 50S ribosomal protein L44e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKVPKVISTYCPKCKTHTDHSVSLYKSGKRRNLAEGQRRYERKNIGYGSKRKPEQKRFAKVTKKQTLVLKCSKCGYTIVK
EGIRVKKLELVEVAK

Sequences:

>Translated_95_residues
MKVPKVISTYCPKCKTHTDHSVSLYKSGKRRNLAEGQRRYERKNIGYGSKRKPEQKRFAKVTKKQTLVLKCSKCGYTIVK
EGIRVKKLELVEVAK
>Mature_95_residues
MKVPKVISTYCPKCKTHTDHSVSLYKSGKRRNLAEGQRRYERKNIGYGSKRKPEQKRFAKVTKKQTLVLKCSKCGYTIVK
EGIRVKKLELVEVAK

Specific function: Unknown

COG id: COG1631

COG function: function code J; Ribosomal protein L44E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L44e family [H]

Homologues:

Organism=Homo sapiens, GI4506651, Length=71, Percent_Identity=47.887323943662, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI10445223, Length=71, Percent_Identity=47.887323943662, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17531725, Length=75, Percent_Identity=45.3333333333333, Blast_Score=68, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24582672, Length=88, Percent_Identity=44.3181818181818, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000552
- InterPro:   IPR011332
- ProDom:   PD002841 [H]

Pfam domain/function: PF00935 Ribosomal_L44 [H]

EC number: NA

Molecular weight: Translated: 10986; Mature: 10986

Theoretical pI: Translated: 10.89; Mature: 10.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPKVISTYCPKCKTHTDHSVSLYKSGKRRNLAEGQRRYERKNIGYGSKRKPEQKRFAK
CCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VTKKQTLVLKCSKCGYTIVKEGIRVKKLELVEVAK
HHHHHEEEEEECCCCHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKVPKVISTYCPKCKTHTDHSVSLYKSGKRRNLAEGQRRYERKNIGYGSKRKPEQKRFAK
CCCCHHHHHHCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VTKKQTLVLKCSKCGYTIVKEGIRVKKLELVEVAK
HHHHHEEEEEECCCCHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]