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The map label for this gene is 15897823

Identifier: 15897823

GI number: 15897823

Start: 800089

End: 801021

Strand: Direct

Name: 15897823

Synonym: SSO0942

Alternate gene names: NA

Gene position: 800089-801021 (Clockwise)

Preceding gene: 15897822

Following gene: 15897824

Centisome position: 26.74

GC content: 32.15

Gene sequence:

>933_bases
ATGAGCAAAAAAATCATCGATGAAGTTATAGACATATTAGAGGATAAAAAATATACTTATACGATGATTGAATATCCAGA
ACATAATAGAAAATCTGTTGACATCGTTCTTAACTCCAAGGAACCCACTCTAATTAGAGTTTCTGAAGATAAGATCACCA
AAGAGGAAATTTCTGACTTGAAGAAAATAGCGGTATCAACGTTAACTGCGTCATTAGTTGTTACTAATGAAGAAGAAGAG
GATATCGTTTCAGTTAAGGCTGATAACGTTTTTGCAATTTCACCAGAAGGATTCAAGAAAGTGATTAACGGCGAGAAAAT
TTTCCTTTATAGAACTAGGGGAGGTATATTCATAAAGATTAGGAATTACATATTAAAACATAAGAGAGAGGAAATGGGAT
ATAGTATAGGAGATGTGGCAAAATTTCTTGGTGTTTCTAGAAAGGCTATTTACGATTACGAGAAGGGGGATTCCGACGTA
TCGCTTGAAGTTGCCGAGAAGTTAATAGATTTGTTTGGAGATGATATAATAGGCGATGTAATATGGGATTCTATAAAAAG
CAAAAAAGAAATCCTTGAAGAGGGCGTAGCAGAGTTTTCTCCAGAGAATTTCAAAGCAAAGTTGATATATAAATTGAAAG
AAAGTGGGTTAAACGCCTTATCATTAAAATTAACTGCAGCAGATTTGATAGTTAAGGATAGCGATAATAACAGATATTTA
GTTACAATAGAGAACAAGGATTATAATAAGTCAATGAAGAAATTTTATGAAGCTAAAAAACTGGCGTCATACACGAAATC
TGAATTAGTAATAATCATAAGGACTTCAAAGATGTTAAAAGAATGTGAAGATCTAGGATATAAAACTTATGAAGAAAATG
ATATACATTCTTTAATAGATGAAATTAAAGGAAGTAACGGAAGGCAAGGTTAG

Upstream 100 bases:

>100_bases
TGTCGAGAAGCTATTGAGGGAATATACATCATTAATATTTATAATTCTTAGTCCTACTAGAAGTTATACAGAAGAAACAG
AATTAAGTGAGATGTAAGAC

Downstream 100 bases:

>100_bases
AATATTCGTACCAGATCCTACAGGATATATGGTAGAAGGAAAATTTGATCCATCATGGGCTCCAGTATTCTATAATCCTA
AAATGACTTTCAATAGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSKKIIDEVIDILEDKKYTYTMIEYPEHNRKSVDIVLNSKEPTLIRVSEDKITKEEISDLKKIAVSTLTASLVVTNEEEE
DIVSVKADNVFAISPEGFKKVINGEKIFLYRTRGGIFIKIRNYILKHKREEMGYSIGDVAKFLGVSRKAIYDYEKGDSDV
SLEVAEKLIDLFGDDIIGDVIWDSIKSKKEILEEGVAEFSPENFKAKLIYKLKESGLNALSLKLTAADLIVKDSDNNRYL
VTIENKDYNKSMKKFYEAKKLASYTKSELVIIIRTSKMLKECEDLGYKTYEENDIHSLIDEIKGSNGRQG

Sequences:

>Translated_310_residues
MSKKIIDEVIDILEDKKYTYTMIEYPEHNRKSVDIVLNSKEPTLIRVSEDKITKEEISDLKKIAVSTLTASLVVTNEEEE
DIVSVKADNVFAISPEGFKKVINGEKIFLYRTRGGIFIKIRNYILKHKREEMGYSIGDVAKFLGVSRKAIYDYEKGDSDV
SLEVAEKLIDLFGDDIIGDVIWDSIKSKKEILEEGVAEFSPENFKAKLIYKLKESGLNALSLKLTAADLIVKDSDNNRYL
VTIENKDYNKSMKKFYEAKKLASYTKSELVIIIRTSKMLKECEDLGYKTYEENDIHSLIDEIKGSNGRQG
>Mature_309_residues
SKKIIDEVIDILEDKKYTYTMIEYPEHNRKSVDIVLNSKEPTLIRVSEDKITKEEISDLKKIAVSTLTASLVVTNEEEED
IVSVKADNVFAISPEGFKKVINGEKIFLYRTRGGIFIKIRNYILKHKREEMGYSIGDVAKFLGVSRKAIYDYEKGDSDVS
LEVAEKLIDLFGDDIIGDVIWDSIKSKKEILEEGVAEFSPENFKAKLIYKLKESGLNALSLKLTAADLIVKDSDNNRYLV
TIENKDYNKSMKKFYEAKKLASYTKSELVIIIRTSKMLKECEDLGYKTYEENDIHSLIDEIKGSNGRQG

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 35386; Mature: 35255

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKIIDEVIDILEDKKYTYTMIEYPEHNRKSVDIVLNSKEPTLIRVSEDKITKEEISDL
CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH
KKIAVSTLTASLVVTNEEEEDIVSVKADNVFAISPEGFKKVINGEKIFLYRTRGGIFIKI
HHHHHHHHHEEEEEECCCCCCEEEEECCCEEEECCHHHHHHHCCCEEEEEEECCCEEEEE
RNYILKHKREEMGYSIGDVAKFLGVSRKAIYDYEKGDSDVSLEVAEKLIDLFGDDIIGDV
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
IWDSIKSKKEILEEGVAEFSPENFKAKLIYKLKESGLNALSLKLTAADLIVKDSDNNRYL
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHCCCCEEEEEEEEEEEEEEECCCCEEE
VTIENKDYNKSMKKFYEAKKLASYTKSELVIIIRTSKMLKECEDLGYKTYEENDIHSLID
EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHH
EIKGSNGRQG
HHCCCCCCCC
>Mature Secondary Structure 
SKKIIDEVIDILEDKKYTYTMIEYPEHNRKSVDIVLNSKEPTLIRVSEDKITKEEISDL
CHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH
KKIAVSTLTASLVVTNEEEEDIVSVKADNVFAISPEGFKKVINGEKIFLYRTRGGIFIKI
HHHHHHHHHEEEEEECCCCCCEEEEECCCEEEECCHHHHHHHCCCEEEEEEECCCEEEEE
RNYILKHKREEMGYSIGDVAKFLGVSRKAIYDYEKGDSDVSLEVAEKLIDLFGDDIIGDV
HHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHHHH
IWDSIKSKKEILEEGVAEFSPENFKAKLIYKLKESGLNALSLKLTAADLIVKDSDNNRYL
HHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEEHHCCCCEEEEEEEEEEEEEEECCCCEEE
VTIENKDYNKSMKKFYEAKKLASYTKSELVIIIRTSKMLKECEDLGYKTYEENDIHSLID
EEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHH
EIKGSNGRQG
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA