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The map label for this gene is rpl24p

Identifier: 15897613

GI number: 15897613

Start: 606655

End: 607014

Strand: Reverse

Name: rpl24p

Synonym: SSO0707

Alternate gene names: 15897613

Gene position: 607014-606655 (Counterclockwise)

Preceding gene: 15897614

Following gene: 15897612

Centisome position: 20.29

GC content: 34.44

Gene sequence:

>360_bases
ATGGTATCTCTTAAACCTTCTAAACAAAGGAAATTACTATATACTTTACCATTGCATCAAAGAAAGAAGCTACTAGTTGC
TAAAGTATCTGATGATATTGCGTCTCAATATGGTATAAAACGTATTAGAGTAAGAAAAGGAGATACTGTTAGGGTAATGC
GAGGAGGTAATAGTGGTAAAGAAGGAAAGGTAGTTGAAGTTAATACTAAGACCGGAAGATTAGCAATAGAAGGAATAACG
AGAAAAAAAGTTGATGGAACACCAGTATATGTGTGGATTCATGCGTCTAAAGTGATGATAACTAAGCTAGATCTGAGTGA
TCCAAGAAGACGGGAAAAGTTAGAAAAATCTAAGAAGTGA

Upstream 100 bases:

>100_bases
GAACACCAAAAGGTACTGAGGTTAGGGGACCGATAGCGAGAGAAGCAGCTGAGAGATGGCCAAAAATAGCTAGTCTCGCT
ACATTGGTGGTGTAAGAGAT

Downstream 100 bases:

>100_bases
TGGAAAAATGGCGCATATAACAAGATTTGAAGCACCTTGGTTTTTAATGATAAGTAAAAAACAATATAAGTGGACGGTTA
GACCTAATGCTGGACCTCAC

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGKEGKVVEVNTKTGRLAIEGIT
RKKVDGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK

Sequences:

>Translated_119_residues
MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGKEGKVVEVNTKTGRLAIEGIT
RKKVDGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
>Mature_119_residues
MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGKEGKVVEVNTKTGRLAIEGIT
RKKVDGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI7705813, Length=112, Percent_Identity=38.3928571428571, Blast_Score=77, Evalue=4e-15,
Organism=Homo sapiens, GI4506621, Length=112, Percent_Identity=38.3928571428571, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17535693, Length=110, Percent_Identity=38.1818181818182, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32564329, Length=98, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17535691, Length=98, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6323376, Length=103, Percent_Identity=39.8058252427184, Blast_Score=77, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6321471, Length=103, Percent_Identity=38.8349514563107, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357853, Length=111, Percent_Identity=37.8378378378378, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_SULSO (Q9UX95)

Other databases:

- EMBL:   Y18930
- EMBL:   AE006641
- PIR:   A90219
- RefSeq:   NP_342218.1
- ProteinModelPortal:   Q9UX95
- GeneID:   1454975
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0707
- NMPDR:   fig|273057.1.peg.641
- HOGENOM:   HBG714769
- OMA:   FLYNAPL
- PhylomeDB:   Q9UX95
- ProtClustDB:   PRK01191
- BioCyc:   SSOL273057:SSO0707-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 13536; Mature: 13536

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGK
CCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEEEECCCEEEEEECCCCCC
EGKVVEVNTKTGRLAIEGITRKKVDGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
CCCEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MVSLKPSKQRKLLYTLPLHQRKKLLVAKVSDDIASQYGIKRIRVRKGDTVRVMRGGNSGK
CCCCCCCCCCEEEEEECCCCCCEEEEEECCHHHHHHCCCEEEEEECCCEEEEEECCCCCC
EGKVVEVNTKTGRLAIEGITRKKVDGTPVYVWIHASKVMITKLDLSDPRRREKLEKSKK
CCCEEEEECCCCEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726