Definition Sulfolobus solfataricus P2 chromosome, complete genome.
Accession NC_002754
Length 2,992,245

Click here to switch to the map view.

The map label for this gene is 15897520

Identifier: 15897520

GI number: 15897520

Start: 527778

End: 529298

Strand: Reverse

Name: 15897520

Synonym: SSO0604

Alternate gene names: NA

Gene position: 529298-527778 (Counterclockwise)

Preceding gene: 15897521

Following gene: 15897508

Centisome position: 17.69

GC content: 37.15

Gene sequence:

>1521_bases
GTGAGTTTTTTGGAGCAGACATTTGATTTCATATTAACTACAGATAGATGTCTGATGACGAATCATCATGGAAAAGAATT
CCTTGGATTTTTAGGTACTGGACCTGCTGTAGGAGTTCCAGAAGCTGTCTGGAAATGGTTAGCATGCCCTAAAATGAAAG
TTGACGATTTAGGAAGACCAGAACAAGCCCCATATGGAATGAGAAAAGTCGAAGCTAAATTAATAGATGAAGGATTTAAG
GCAGCAATAATAGATCCAGATCATTTAGATAGACACTTGAAATATGCTAAGGCCCTAATGTTTTCGCACCATGATTACTT
CGCTTTTGGTCCACCATCATCAACTTGGTGGGGCATAACTAAAAAGGAGCCAATAAACTACAAGAGTTTCCAAGCTCTGA
TAAGCAAACCGGAGATTCAAGAGGCTAAAAAGAGAGGAATGAAGATATTAGTAGGTGGTCCTTCGACATGGCAATGGTTA
TGGAGAGAAGATATGATAGAAAAAGTTGGCGTAGACACGTTAGTAGATGGTGAAGGAGAGAAGGTAGTAGTCAAATTAGC
ACAAATGATACTAGATAATGAGCCATTGCCTAAGTACGTTTACGTTAGCGGAGACGATGTGCCAGATATAGACGATATTT
CAGAGATTAAAGGAGCAAGCGTCAATGGCATGATAGAAATAATGAGAGGATGTGCAAGATCTTGCAGATTCTGTTCAGTT
ACTATAAGACCTACTAGGTATTATCCATTAGAAAAAATCGAAAAGGAATTGCAAACTAATGTTAGAGCAGGGGTAAGACA
TGGCGTTGTACATAGTGATGACGTTCTATTTTACGGTGCAGTAGGAATATATCCTAGACCCGAACCATTAATAAAACTTC
ATACGCTAGTTAAGAAATATTATAAAACAATAGCGTGGAGTCATGCAAGTTTAGCGGCAATAAGATACTCTGAGGAGAAA
TATGGTTTAATTAGTAAGCTAGGTGAGATAATATTTGATGATGAACAAAGATATCTAGGTGTTGAGGTAGGGATAGAAAC
TGGTTCTGTCAAGTTAGCTAAAGAGATAATGCCAGCTAAATCTGCACCATATAAGCCAGAAGAATATCCAGAGATCGTAG
AAGAAGCGTTTAAGATAATGCATGAAAACAAGATAATTCCTGCAGGCACAATGATAGTAGGTTTACCGGAAGAGACAGAA
GATGATGTGTACAGAACAATAGAATTAGTAGATAATTTGAGACCATATAGAAGTATATTAGTTCCTATGTTCTTTGTACC
TATGGGCTTTTTCAAAAATAGAGATTGGTTCACTAGAGTTAAGTTAAGTGAGGCCCATATAGAGTTATACAGAAAAGTAT
TCTGGCACGACGTATATTGGGCTGAGGATATTATAAATTCCTTCTACATGAAAGGACCAGTGTATATGCCAGTAAGATTC
GCACTGAAGCTATTCTTAAGATTCGCAAAGAAGAAAATGAGAGAAGTAGAAAAATGGTTGGAGAATCAATTAAAAGCATA
A

Upstream 100 bases:

>100_bases
GAAACAATGCGACAGAAGACTTAAAGAAGAATTTTAGAAAAGTAGTACAACTTTTATAAAAAGGGTTTTTATATACGATT
ATAAGAGTGAGAATAAATAG

Downstream 100 bases:

>100_bases
AACTAAATTATCTTATTTTTTAGCGGGTATATATAATCTTTAGGAGCCTTCGGAAACGCCTCAAGATATTTTCTTAGTAC
TTTTGGTACCTCGACAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S Oxidoreductase; Radical SAM Domain Protein; Radical Sam Domain Protein; Oxidative Cyclase

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFK
AAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWL
WREDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV
TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEK
YGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETE
DDVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF
ALKLFLRFAKKKMREVEKWLENQLKA

Sequences:

>Translated_506_residues
MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFK
AAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWL
WREDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV
TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEK
YGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETE
DDVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF
ALKLFLRFAKKKMREVEKWLENQLKA
>Mature_505_residues
SFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFKA
AIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLW
REDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVT
IRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEKY
GLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETED
DVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRFA
LKLFLRFAKKKMREVEKWLENQLKA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58355; Mature: 58224

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRP
CCHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
EQAPYGMRKVEAKLIDEGFKAAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGIT
CCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
KKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGE
CCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCC
KVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEE
TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKY
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
YKTIAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAK
HHHHHCCCHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC
SAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRPYRSIL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH
VPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALKLFLRFAKKKMREVEKWLENQLKA
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRP
CHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
EQAPYGMRKVEAKLIDEGFKAAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGIT
CCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC
KKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGE
CCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCC
KVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV
HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEE
TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKY
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
YKTIAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAK
HHHHHCCCHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC
SAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRPYRSIL
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH
VPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF
HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
ALKLFLRFAKKKMREVEKWLENQLKA
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA