| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is 15897520
Identifier: 15897520
GI number: 15897520
Start: 527778
End: 529298
Strand: Reverse
Name: 15897520
Synonym: SSO0604
Alternate gene names: NA
Gene position: 529298-527778 (Counterclockwise)
Preceding gene: 15897521
Following gene: 15897508
Centisome position: 17.69
GC content: 37.15
Gene sequence:
>1521_bases GTGAGTTTTTTGGAGCAGACATTTGATTTCATATTAACTACAGATAGATGTCTGATGACGAATCATCATGGAAAAGAATT CCTTGGATTTTTAGGTACTGGACCTGCTGTAGGAGTTCCAGAAGCTGTCTGGAAATGGTTAGCATGCCCTAAAATGAAAG TTGACGATTTAGGAAGACCAGAACAAGCCCCATATGGAATGAGAAAAGTCGAAGCTAAATTAATAGATGAAGGATTTAAG GCAGCAATAATAGATCCAGATCATTTAGATAGACACTTGAAATATGCTAAGGCCCTAATGTTTTCGCACCATGATTACTT CGCTTTTGGTCCACCATCATCAACTTGGTGGGGCATAACTAAAAAGGAGCCAATAAACTACAAGAGTTTCCAAGCTCTGA TAAGCAAACCGGAGATTCAAGAGGCTAAAAAGAGAGGAATGAAGATATTAGTAGGTGGTCCTTCGACATGGCAATGGTTA TGGAGAGAAGATATGATAGAAAAAGTTGGCGTAGACACGTTAGTAGATGGTGAAGGAGAGAAGGTAGTAGTCAAATTAGC ACAAATGATACTAGATAATGAGCCATTGCCTAAGTACGTTTACGTTAGCGGAGACGATGTGCCAGATATAGACGATATTT CAGAGATTAAAGGAGCAAGCGTCAATGGCATGATAGAAATAATGAGAGGATGTGCAAGATCTTGCAGATTCTGTTCAGTT ACTATAAGACCTACTAGGTATTATCCATTAGAAAAAATCGAAAAGGAATTGCAAACTAATGTTAGAGCAGGGGTAAGACA TGGCGTTGTACATAGTGATGACGTTCTATTTTACGGTGCAGTAGGAATATATCCTAGACCCGAACCATTAATAAAACTTC ATACGCTAGTTAAGAAATATTATAAAACAATAGCGTGGAGTCATGCAAGTTTAGCGGCAATAAGATACTCTGAGGAGAAA TATGGTTTAATTAGTAAGCTAGGTGAGATAATATTTGATGATGAACAAAGATATCTAGGTGTTGAGGTAGGGATAGAAAC TGGTTCTGTCAAGTTAGCTAAAGAGATAATGCCAGCTAAATCTGCACCATATAAGCCAGAAGAATATCCAGAGATCGTAG AAGAAGCGTTTAAGATAATGCATGAAAACAAGATAATTCCTGCAGGCACAATGATAGTAGGTTTACCGGAAGAGACAGAA GATGATGTGTACAGAACAATAGAATTAGTAGATAATTTGAGACCATATAGAAGTATATTAGTTCCTATGTTCTTTGTACC TATGGGCTTTTTCAAAAATAGAGATTGGTTCACTAGAGTTAAGTTAAGTGAGGCCCATATAGAGTTATACAGAAAAGTAT TCTGGCACGACGTATATTGGGCTGAGGATATTATAAATTCCTTCTACATGAAAGGACCAGTGTATATGCCAGTAAGATTC GCACTGAAGCTATTCTTAAGATTCGCAAAGAAGAAAATGAGAGAAGTAGAAAAATGGTTGGAGAATCAATTAAAAGCATA A
Upstream 100 bases:
>100_bases GAAACAATGCGACAGAAGACTTAAAGAAGAATTTTAGAAAAGTAGTACAACTTTTATAAAAAGGGTTTTTATATACGATT ATAAGAGTGAGAATAAATAG
Downstream 100 bases:
>100_bases AACTAAATTATCTTATTTTTTAGCGGGTATATATAATCTTTAGGAGCCTTCGGAAACGCCTCAAGATATTTTCTTAGTAC TTTTGGTACCTCGACAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Fe-S Oxidoreductase; Radical SAM Domain Protein; Radical Sam Domain Protein; Oxidative Cyclase
Number of amino acids: Translated: 506; Mature: 505
Protein sequence:
>506_residues MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFK AAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWL WREDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEK YGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETE DDVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF ALKLFLRFAKKKMREVEKWLENQLKA
Sequences:
>Translated_506_residues MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFK AAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWL WREDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEK YGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETE DDVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF ALKLFLRFAKKKMREVEKWLENQLKA >Mature_505_residues SFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRPEQAPYGMRKVEAKLIDEGFKA AIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGITKKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLW REDMIEKVGVDTLVDGEGEKVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSVT IRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKYYKTIAWSHASLAAIRYSEEKY GLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAKSAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETED DVYRTIELVDNLRPYRSILVPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRFA LKLFLRFAKKKMREVEKWLENQLKA
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58355; Mature: 58224
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRP CCHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC EQAPYGMRKVEAKLIDEGFKAAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGIT CCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC KKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGE CCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCC KVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEE TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKY EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH YKTIAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAK HHHHHCCCHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC SAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRPYRSIL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH VPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALKLFLRFAKKKMREVEKWLENQLKA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFLEQTFDFILTTDRCLMTNHHGKEFLGFLGTGPAVGVPEAVWKWLACPKMKVDDLGRP CHHHHHHHHHHCCCHHEECCCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCC EQAPYGMRKVEAKLIDEGFKAAIIDPDHLDRHLKYAKALMFSHHDYFAFGPPSSTWWGIT CCCCCCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCC KKEPINYKSFQALISKPEIQEAKKRGMKILVGGPSTWQWLWREDMIEKVGVDTLVDGEGE CCCCCCHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEECCCCC KVVVKLAQMILDNEPLPKYVYVSGDDVPDIDDISEIKGASVNGMIEIMRGCARSCRFCSV HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCEEEE TIRPTRYYPLEKIEKELQTNVRAGVRHGVVHSDDVLFYGAVGIYPRPEPLIKLHTLVKKY EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH YKTIAWSHASLAAIRYSEEKYGLISKLGEIIFDDEQRYLGVEVGIETGSVKLAKEIMPAK HHHHHCCCHHHEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCC SAPYKPEEYPEIVEEAFKIMHENKIIPAGTMIVGLPEETEDDVYRTIELVDNLRPYRSIL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHH VPMFFVPMGFFKNRDWFTRVKLSEAHIELYRKVFWHDVYWAEDIINSFYMKGPVYMPVRF HHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH ALKLFLRFAKKKMREVEKWLENQLKA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA