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The map label for this gene is yvrC [H]

Identifier: 15897411

GI number: 15897411

Start: 417750

End: 418706

Strand: Direct

Name: yvrC [H]

Synonym: SSO0485

Alternate gene names: 15897411

Gene position: 417750-418706 (Clockwise)

Preceding gene: 15897410

Following gene: 15897412

Centisome position: 13.96

GC content: 33.96

Gene sequence:

>957_bases
ATGCCAAGCGTAAAAGCGATTGGTACGATAGTAGCTATAATTATAGTAGTGAGTGTAATTTCCGTCTACTATTATTACAA
GAGTTCTTCTACATTACAACCGGCTACTGTTAACAATAATCTTAGAATTGTATCATTAGCACCTAGTGATACACAAATTC
TAATAAGTTTAGGCTTAGGTAAATATATAGTGGGAACTGATTACTATTCATACCAGTTATTGCAATCTCTTAACCTCACA
AAGGATATACCATCTAATATTACAGTGTTTTCTCAAATATCTCCTCCAAATATTTCTGGCCTGCTACTATTACATCCAAC
GGTTATTGTAGTTGAAAAAGGGCTTATAGGAAGTTACATAGAGCAAATGAAAGAAGCTGGACTTAACGTCTTAATTACGA
ATAATGATTTTGCAAGTACCTATTCCCAGATAGAAAATTGTATATTAAAAGTAGGAGAGTATTTTAATGTAACTAGTAAA
GCTCAACAGTTAATAGATTGGATGAATCAGAAAATAAGCGATTTCTCTACTGCAGGAAATGTAAGCGTAGCTTATTTATT
ATGGATATGCCCAGATTTAAGTTTCTACACCGCTGGCGGGAACGTTTTTATAAATAGCATAATTGTTCAAGCGGGCGGTA
TTAACGTTTTTGCGAACTACTCTGGCTATCCATTATTAACCCCGTCACCACTATTGATAATAAAACCCTCTGTCGTAATT
GCGCAGGAAGTATATAATTTAACTTACACCAACTACTTAATTTCCCAATATAAGGGAATAAATAGTAGTAATCTCTATAT
AATAGGAAATCTAGCAACTAACCTATTAAATGAACCAGGACCACTTTCGGTGTATTCCATACAAGTTATTAAACTCATAA
TTGAGGGAAAGGCGCCACATTTCATTTCAGACAATTGGGTGATAAACAATCTTAATGTAACTCTGCCGGTGTTTTAG

Upstream 100 bases:

>100_bases
CCATACGACTAAGGCAGCCGATAGAATAAACTTCAATTTAATATTTTCTTATTCTAACTGAGCCAAAAAATTTATAGTTT
GGATAGTCTATCCAGACATT

Downstream 100 bases:

>100_bases
ATGGTTCGTTTAAGTGGTATTTTTTTAATTATAGGATTTATTATTTCGTTTTTGCTTGGGTTACTCTACGGTGATGTTAC
TATACCGATTAGCGAGATTT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPSVKAIGTIVAIIIVVSVISVYYYYKSSSTLQPATVNNNLRIVSLAPSDTQILISLGLGKYIVGTDYYSYQLLQSLNLT
KDIPSNITVFSQISPPNISGLLLLHPTVIVVEKGLIGSYIEQMKEAGLNVLITNNDFASTYSQIENCILKVGEYFNVTSK
AQQLIDWMNQKISDFSTAGNVSVAYLLWICPDLSFYTAGGNVFINSIIVQAGGINVFANYSGYPLLTPSPLLIIKPSVVI
AQEVYNLTYTNYLISQYKGINSSNLYIIGNLATNLLNEPGPLSVYSIQVIKLIIEGKAPHFISDNWVINNLNVTLPVF

Sequences:

>Translated_318_residues
MPSVKAIGTIVAIIIVVSVISVYYYYKSSSTLQPATVNNNLRIVSLAPSDTQILISLGLGKYIVGTDYYSYQLLQSLNLT
KDIPSNITVFSQISPPNISGLLLLHPTVIVVEKGLIGSYIEQMKEAGLNVLITNNDFASTYSQIENCILKVGEYFNVTSK
AQQLIDWMNQKISDFSTAGNVSVAYLLWICPDLSFYTAGGNVFINSIIVQAGGINVFANYSGYPLLTPSPLLIIKPSVVI
AQEVYNLTYTNYLISQYKGINSSNLYIIGNLATNLLNEPGPLSVYSIQVIKLIIEGKAPHFISDNWVINNLNVTLPVF
>Mature_317_residues
PSVKAIGTIVAIIIVVSVISVYYYYKSSSTLQPATVNNNLRIVSLAPSDTQILISLGLGKYIVGTDYYSYQLLQSLNLTK
DIPSNITVFSQISPPNISGLLLLHPTVIVVEKGLIGSYIEQMKEAGLNVLITNNDFASTYSQIENCILKVGEYFNVTSKA
QQLIDWMNQKISDFSTAGNVSVAYLLWICPDLSFYTAGGNVFINSIIVQAGGINVFANYSGYPLLTPSPLLIIKPSVVIA
QEVYNLTYTNYLISQYKGINSSNLYIIGNLATNLLNEPGPLSVYSIQVIKLIIEGKAPHFISDNWVINNLNVTLPVF

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 34840; Mature: 34709

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVKAIGTIVAIIIVVSVISVYYYYKSSSTLQPATVNNNLRIVSLAPSDTQILISLGLG
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEECCC
KYIVGTDYYSYQLLQSLNLTKDIPSNITVFSQISPPNISGLLLLHPTVIVVEKGLIGSYI
CEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCHHHHHH
EQMKEAGLNVLITNNDFASTYSQIENCILKVGEYFNVTSKAQQLIDWMNQKISDFSTAGN
HHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
VSVAYLLWICPDLSFYTAGGNVFINSIIVQAGGINVFANYSGYPLLTPSPLLIIKPSVVI
CCEEEEEEECCCCEEEECCCCEEEEEEEEEECCEEEEECCCCCEEECCCCEEEECCCHHE
AQEVYNLTYTNYLISQYKGINSSNLYIIGNLATNLLNEPGPLSVYSIQVIKLIIEGKAPH
EHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCEEHHHEEEEEEECCCCCC
FISDNWVINNLNVTLPVF
EECCCEEEEECEEEEECC
>Mature Secondary Structure 
PSVKAIGTIVAIIIVVSVISVYYYYKSSSTLQPATVNNNLRIVSLAPSDTQILISLGLG
CCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEECCC
KYIVGTDYYSYQLLQSLNLTKDIPSNITVFSQISPPNISGLLLLHPTVIVVEKGLIGSYI
CEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCEEEEEECCHHHHHH
EQMKEAGLNVLITNNDFASTYSQIENCILKVGEYFNVTSKAQQLIDWMNQKISDFSTAGN
HHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
VSVAYLLWICPDLSFYTAGGNVFINSIIVQAGGINVFANYSGYPLLTPSPLLIIKPSVVI
CCEEEEEEECCCCEEEECCCCEEEEEEEEEECCEEEEECCCCCEEECCCCEEEECCCHHE
AQEVYNLTYTNYLISQYKGINSSNLYIIGNLATNLLNEPGPLSVYSIQVIKLIIEGKAPH
EHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCCCCEEHHHEEEEEEECCCCCC
FISDNWVINNLNVTLPVF
EECCCEEEEECEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]