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The map label for this gene is 15897403

Identifier: 15897403

GI number: 15897403

Start: 410443

End: 412068

Strand: Reverse

Name: 15897403

Synonym: SSO0477

Alternate gene names: NA

Gene position: 412068-410443 (Counterclockwise)

Preceding gene: 15897406

Following gene: 15897400

Centisome position: 13.77

GC content: 38.75

Gene sequence:

>1626_bases
ATGAATACTTTTTATAGTAGGAAAGTAAAATATAATATTATGGCATGGGAGATCATATTAACCGCGGATAAAGGGTCTTT
TACAGATTATGGGGGTTCAAGTGTATTAGGTTATGTAGCTTGCATGCCATCAAGACTAATACCCAAATTCTTTATGGATA
GATTCTTCACTCCAGATGTCCCAGTGGATTCTGAAGGAAGAGCAATAGTAGCACCGTACGCTCTTAGAAAAGTAGAAAGT
ACGCTTGTTCATGCGGGATTCGATAGCGTTGTAGTAATACCTCCGCACAGACTAGAGAAAGCAATAAACCAGAAGACTAA
AGTAGTGGGATTAACAGTTCATGATCCCTTTGGCCTAAATCCAGTTAGCTTTAAGTTAAGTATGATATTTGGAGGTGGTC
CTACATGGACAGCCAAATATTTCGAAGAATTTGGAGAAAAGATCTCGAAGCTTAAGTCAAAGTATAATTTTAAAGTAATA
GTAGGTGGGCCAGGGAGCTGGGAGTTAACCAAGGAGAATAAGGATTGGGCAGATGTTATATTCATAGGAGAAGCTGAAGC
AGATCTACCACGAGTTGTAAAATCCATAATTGATGGACAAGAAGTCCCTAAAGTTGTCTATGGCAAGAATCCAAAGGTAA
ATGAAATACCACCAATAATAAACCCTGCAAGACTAGGGGAAGTTCAAATAACCAGAGGATGTCCAAGAGGATGTCAATTC
TGTCCAATAACCCCTGAAACCTTTAGAACGATACCATTAGACGTTGTGAAGAAGGAAGTTGAAGTTAACATGAGGGCTGG
TGTAAAGAGGGTTGAATTTATAACTGATGATGTCCTACTGTACGGTTCACAGAAGTTGAGGGTAAATCACGAAGCTATTA
CAAAGTTGTTTACCGAAACCATGAATATGGGAGTAGATGGGATATGGTTTCCACATATCTCTGCCCCAGCTGTTAGAAGT
AGTCCACAAACAGTAAAGGCTATGTCTGAGATTGCAAGATATGATGAGGATAGAGCTGCTGCTCCAGTGGTTGGACTAGA
GAGTGGAAGTGAGAAGATACTAAGTAAGTACATGAGAGCAAAGCCATTCCCTTGGACTCCTAGAGAGTGGAAAGATGTCA
TACTTGATGCGACTGCGATAATGAACGATAATTACATCTATCCTTGTTACACTATGACAATAGGTTATCCAGAGGAGACA
AATGAAGATGTTGATCAATCAATTGATTTAGTTCAGTCCATAATTGATCATAAACTTAAAGCTTGGATATTCCCATTGCC
GGTCATACCTATGGGAGTTTCTTATATAAGAAATAATCCATTTCCAGTGTTAGAAAAAATGCCCACCAGATATTGGGATG
TACTATACATATCGTGGAAATACGATTTACAGATAACGAGAGAGATGATACCAATTCTCACTGGAGGTATCAAGAACAAA
TTCGCTCAAAGGACTGTCCAATACATGATAGACAAAATATTCTACAGCATTGAATGGGTATTTAAACAACTAAAAGAGAC
ACAAGGGAAATATGCGTACACTTTCGCAAGTATCAATCTCAATAACACGACGGGAGTGATAAAGGCGATCTACTGGTTAT
TCAGGTTAGCCTTTAAACCTCTTTGA

Upstream 100 bases:

>100_bases
CTAAAAGTAATTAGACGTAATAGTTCCAAGCTTTAGTATAATTCTATATACAATAAAAAAGTTTACATAAATTAAATATT
ACTCTTTTATACGCCCTATA

Downstream 100 bases:

>100_bases
TCTTTTCTACAATTGCATCGGAAATGTTTTTCCAGACAATTTTATAACCTAGATAATCTATAATGTCAACTATATAATTT
CCATATTTGTTAACTAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MNTFYSRKVKYNIMAWEIILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDVPVDSEGRAIVAPYALRKVES
TLVHAGFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLNPVSFKLSMIFGGGPTWTAKYFEEFGEKISKLKSKYNFKVI
VGGPGSWELTKENKDWADVIFIGEAEADLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQF
CPITPETFRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLYGSQKLRVNHEAITKLFTETMNMGVDGIWFPHISAPAVRS
SPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRAKPFPWTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEET
NEDVDQSIDLVQSIIDHKLKAWIFPLPVIPMGVSYIRNNPFPVLEKMPTRYWDVLYISWKYDLQITREMIPILTGGIKNK
FAQRTVQYMIDKIFYSIEWVFKQLKETQGKYAYTFASINLNNTTGVIKAIYWLFRLAFKPL

Sequences:

>Translated_541_residues
MNTFYSRKVKYNIMAWEIILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDVPVDSEGRAIVAPYALRKVES
TLVHAGFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLNPVSFKLSMIFGGGPTWTAKYFEEFGEKISKLKSKYNFKVI
VGGPGSWELTKENKDWADVIFIGEAEADLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQF
CPITPETFRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLYGSQKLRVNHEAITKLFTETMNMGVDGIWFPHISAPAVRS
SPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRAKPFPWTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEET
NEDVDQSIDLVQSIIDHKLKAWIFPLPVIPMGVSYIRNNPFPVLEKMPTRYWDVLYISWKYDLQITREMIPILTGGIKNK
FAQRTVQYMIDKIFYSIEWVFKQLKETQGKYAYTFASINLNNTTGVIKAIYWLFRLAFKPL
>Mature_541_residues
MNTFYSRKVKYNIMAWEIILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDVPVDSEGRAIVAPYALRKVES
TLVHAGFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLNPVSFKLSMIFGGGPTWTAKYFEEFGEKISKLKSKYNFKVI
VGGPGSWELTKENKDWADVIFIGEAEADLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQF
CPITPETFRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLYGSQKLRVNHEAITKLFTETMNMGVDGIWFPHISAPAVRS
SPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRAKPFPWTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEET
NEDVDQSIDLVQSIIDHKLKAWIFPLPVIPMGVSYIRNNPFPVLEKMPTRYWDVLYISWKYDLQITREMIPILTGGIKNK
FAQRTVQYMIDKIFYSIEWVFKQLKETQGKYAYTFASINLNNTTGVIKAIYWLFRLAFKPL

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 61550; Mature: 61550

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFYSRKVKYNIMAWEIILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDV
CCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC
PVDSEGRAIVAPYALRKVESTLVHAGFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLN
CCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEEECCCCCC
PVSFKLSMIFGGGPTWTAKYFEEFGEKISKLKSKYNFKVIVGGPGSWELTKENKDWADVI
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEEE
FIGEAEADLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQF
EEECCCCHHHHHHHHHHCCHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
CPITPETFRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLYGSQKLRVNHEAITKLFTET
CCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCEEEECHHHHHHHHHHH
MNMGVDGIWFPHISAPAVRSSPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRA
HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHC
KPFPWTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEETNEDVDQSIDLVQSIIDHKLK
CCCCCCCHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
AWIFPLPVIPMGVSYIRNNPFPVLEKMPTRYWDVLYISWKYDLQITREMIPILTGGIKNK
HHEECCCHHHCCHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHCHHHHH
FAQRTVQYMIDKIFYSIEWVFKQLKETQGKYAYTFASINLNNTTGVIKAIYWLFRLAFKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MNTFYSRKVKYNIMAWEIILTADKGSFTDYGGSSVLGYVACMPSRLIPKFFMDRFFTPDV
CCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCC
PVDSEGRAIVAPYALRKVESTLVHAGFDSVVVIPPHRLEKAINQKTKVVGLTVHDPFGLN
CCCCCCCEEECHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCCEEEEEEEECCCCCC
PVSFKLSMIFGGGPTWTAKYFEEFGEKISKLKSKYNFKVIVGGPGSWELTKENKDWADVI
CEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCEEEEE
FIGEAEADLPRVVKSIIDGQEVPKVVYGKNPKVNEIPPIINPARLGEVQITRGCPRGCQF
EEECCCCHHHHHHHHHHCCHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
CPITPETFRTIPLDVVKKEVEVNMRAGVKRVEFITDDVLLYGSQKLRVNHEAITKLFTET
CCCCHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCEEEECHHHHHHHHHHH
MNMGVDGIWFPHISAPAVRSSPQTVKAMSEIARYDEDRAAAPVVGLESGSEKILSKYMRA
HHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHC
KPFPWTPREWKDVILDATAIMNDNYIYPCYTMTIGYPEETNEDVDQSIDLVQSIIDHKLK
CCCCCCCHHHHHHHHHHHHEECCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
AWIFPLPVIPMGVSYIRNNPFPVLEKMPTRYWDVLYISWKYDLQITREMIPILTGGIKNK
HHEECCCHHHCCHHHHCCCCCCHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHCHHHHH
FAQRTVQYMIDKIFYSIEWVFKQLKETQGKYAYTFASINLNNTTGVIKAIYWLFRLAFKP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]