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The map label for this gene is 15897232

Identifier: 15897232

GI number: 15897232

Start: 246892

End: 247233

Strand: Reverse

Name: 15897232

Synonym: SSO0288

Alternate gene names: NA

Gene position: 247233-246892 (Counterclockwise)

Preceding gene: 15897233

Following gene: 15897231

Centisome position: 8.26

GC content: 44.44

Gene sequence:

>342_bases
TTGGCAACCATAATACAGTGGGTGAAAATAAAGGAAAAACAACATCATTATAAATATGGCGACATAATTATACGTGAAAG
AAAAGGGCGGTATTATGTTTACAAACTAGAGTATGAGAACGGTAACGTAAAGGAAACTTACGTCGACCCTTTAGTTGACG
TAGTTGAAACGTACGAAAAATTGAAAGATAGCAGTGGGGGTTTTAGGGGGTATCCCCCTAACCCCACAACGGACCCGCCG
GGATTTGAACCCGGGACCTCTGGCTCCGGAGGCCGGCGCTCCATCCTGGCTGAGCTACGGGTCCAACATAAATATACACT
ATACGGTCTTTTAAACTGTTAG

Upstream 100 bases:

>100_bases
TAAGCTTCTTCTCGCTATCGAGGAATCTTTGCCGTCTTCTTTCAATTCAACGCTTTTTGATGACAAAAACTAACGAGTTT
GCAGAGCTTATAACTCTCTT

Downstream 100 bases:

>100_bases
ACACGCTATCCTTACAAAAATGAGAACGGCTTTTTTTAGTGATTAACATCGTATCATAAAAACTTTATTAAATTATAACG
TGATTACTGTATCCATATAT

Product: integrase, (fragment)

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MATIIQWVKIKEKQHHYKYGDIIIRERKGRYYVYKLEYENGNVKETYVDPLVDVVETYEKLKDSSGGFRGYPPNPTTDPP
GFEPGTSGSGGRRSILAELRVQHKYTLYGLLNC

Sequences:

>Translated_113_residues
MATIIQWVKIKEKQHHYKYGDIIIRERKGRYYVYKLEYENGNVKETYVDPLVDVVETYEKLKDSSGGFRGYPPNPTTDPP
GFEPGTSGSGGRRSILAELRVQHKYTLYGLLNC
>Mature_112_residues
ATIIQWVKIKEKQHHYKYGDIIIRERKGRYYVYKLEYENGNVKETYVDPLVDVVETYEKLKDSSGGFRGYPPNPTTDPPG
FEPGTSGSGGRRSILAELRVQHKYTLYGLLNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13033; Mature: 12902

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIIQWVKIKEKQHHYKYGDIIIRERKGRYYVYKLEYENGNVKETYVDPLVDVVETYEK
CCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
LKDSSGGFRGYPPNPTTDPPGFEPGTSGSGGRRSILAELRVQHKYTLYGLLNC
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECC
>Mature Secondary Structure 
ATIIQWVKIKEKQHHYKYGDIIIRERKGRYYVYKLEYENGNVKETYVDPLVDVVETYEK
CCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
LKDSSGGFRGYPPNPTTDPPGFEPGTSGSGGRRSILAELRVQHKYTLYGLLNC
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA