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The map label for this gene is yjjK [C]

Identifier: 15897231

GI number: 15897231

Start: 244748

End: 246550

Strand: Reverse

Name: yjjK [C]

Synonym: SSO0287

Alternate gene names: 15897231

Gene position: 246550-244748 (Counterclockwise)

Preceding gene: 15897232

Following gene: 15897230

Centisome position: 8.24

GC content: 34.0

Gene sequence:

>1803_bases
GTGAGAGTTGCTGTAATAAATTATGACTTTTGTAAGCCAGATAAATGTAACTTAGAGTGTATAAATTTCTGTCCTGTTGA
TAGGTCTGGAGGAAAAGCCATAGAACTGTCGGAAATTGTTAAGGGAAAACCAGTAATTTATGAAGAAACTTGTATAGGTT
GTGGAATATGTGTAAAGAAATGTCCATATGAAGCTATATCAATTGTTAATCTTCCAGACGAGTTAGAAGGAGAGGTTATA
CATAGATACAAAGTAAATGGGTTCAAATTATTCGGCTTACCTACACCTAAAAATAATACGATATTAGGAGTATTAGGGAA
GAATGGAGTAGGGAAAACCACAGTACTTAAAATACTAGCTGGTGAAATAATCCCAAATTTTGGAGATCCAAATTCCAAAG
TAGGTAAAGACGAAGTGTTAAAAAGGTTTAGAGGAAAAGAAATTTATAATTATTTTAAAGAATTATATAGTAATGAACTA
AAAATAGTACATAAGATTCAATACGTTGAGTACGCTTCAAAATTCCTTAAAGGTACGGTGAATGAAATTTTGACAAAGAT
AGATGAAAGAGGGAAAAAGGATGAAGTTAAAGAACTTCTAAACATGACTAATCTTTGGAATAAGGATGCTAATATACTTT
CTGGAGGAGGACTTCAGCGATTATTAGTAGCTGCTTCACTATTGAGAGAAGCAGATGTATACATATTTGACGAACCTTCT
TCTTATCTAGATGTTAGGGAAAGAATGAATATGGCTAAGGCAATTAGAGAATTGTTAAAGAATAAATATGTTATAGTTGT
GGATCATGACTTAATAGTTTTGGATTATCTTACAGATTTAATACATATAATCTATGGAGAAAGTTCAGTATATGGAAGGG
TTTCAAAATCTTATGCAGCTAGAGTAGGGATAAATAATTTTCTTAAAGGATATTTACCAGCTGAAAATATGAAAATAAGA
CCAGACGAAATAAAGTTTATGCTAAAAGAGGTTAGTGACCTAGACCTTTCCAAAGATCTAAAAACAAAAATGAAATGGAC
TAAGATAATCAAGAAGTTAGGTGATTTTCAGTTAGTAGTAGATAATGGAGAGGCTAAAGAGGGAGAAATAATCGGAATTT
TAGGACCAAACGGAATTGGAAAGACAACTTTCGCAAGAATATTAGTTGGCGAAATTACAGCAGATGAAGGATCTGTAACC
CCAGAAAAACAAATATTATCTTATAAACCACAACGAATCTTTCCTAACTATGATGGAACTGTTCAACAATACTTAGAAAA
TGCGAGTAAAGACGCTCTTTCTACCTCATCCTGGTTCTTCGAAGAGGTAACTAAAAGGCTTAACTTGCACAGACTGCTGG
AATCTAATGTGAATGATCTAAGTGGAGGCGAATTACAGAAATTATATATAGCAGCTACTTTGGCAAAAGAAGCTGATCTT
TACGTTTTGGATGAACCTTCCTCTTATCTCGATGTCGAAGAGAGATATATAGTCGCTAAAGCTATAAAGAGAGTTACGAG
GGAGAGGAAAGCGGTAACTTTTATCATAGATCACGATCTTTCAATACATGATTATATAGCGGATAGAATTATCGTTTTCA
AAGGAGAACCAGAAAAAGCTGGATTAGCAACATCTCCGGTAACGTTAAAGACGGGAATGAATGAGTTTTTGAGAGAATTG
GAGGTAACGTTCAGGAGAGATGCAGAGACCGGAAGACCTAGAGTAAATAAGATTGGGAGTTACTTAGATAGAGTCCAGAA
AGAAAGAGGAGATTATTACTCCATGGTTCTTTCTACCCAGTAA

Upstream 100 bases:

>100_bases
TTAAAAGTAGAGGAAGATTTATTAAATGACAAAAGGGGAAGTTTTATAGGATGTGAATATTCTAACAACCAGTATATTTC
TACATAATAGGTGAGTATTC

Downstream 100 bases:

>100_bases
GATTTTTAGTTATGTATATCTAAATTAAATTATGAAAACTACACTTAGTGTAATCAAGGCCGATATAGGAAGCCTAGCTG
GACATCATGTTGTTCACCCT

Product: putative ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEVI
HRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNEL
KIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMKIR
PDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVT
PEKQILSYKPQRIFPNYDGTVQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLREL
EVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ

Sequences:

>Translated_600_residues
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEVI
HRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNEL
KIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMKIR
PDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVT
PEKQILSYKPQRIFPNYDGTVQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLREL
EVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ
>Mature_600_residues
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKKCPYEAISIVNLPDELEGEVI
HRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNEL
KIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPAENMKIR
PDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVT
PEKQILSYKPQRIFPNYDGTVQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFLREL
EVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=593, Percent_Identity=45.362563237774, Blast_Score=525, Evalue=1e-149,
Organism=Homo sapiens, GI108773782, Length=593, Percent_Identity=45.362563237774, Blast_Score=525, Evalue=1e-149,
Organism=Homo sapiens, GI27262624, Length=183, Percent_Identity=30.6010928961749, Blast_Score=76, Evalue=1e-13,
Organism=Homo sapiens, GI27262626, Length=183, Percent_Identity=30.6010928961749, Blast_Score=76, Evalue=1e-13,
Organism=Escherichia coli, GI1788506, Length=507, Percent_Identity=24.2603550295858, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1788165, Length=186, Percent_Identity=29.5698924731183, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786345, Length=193, Percent_Identity=25.9067357512953, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1788002, Length=193, Percent_Identity=29.0155440414508, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1788225, Length=192, Percent_Identity=30.7291666666667, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1790739, Length=232, Percent_Identity=24.1379310344828, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=190, Percent_Identity=27.3684210526316, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786803, Length=193, Percent_Identity=25.9067357512953, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87082267, Length=185, Percent_Identity=23.7837837837838, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786253, Length=192, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI48994997, Length=200, Percent_Identity=26.5, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1790467, Length=188, Percent_Identity=27.6595744680851, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=597, Percent_Identity=43.0485762144054, Blast_Score=488, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6320296, Length=599, Percent_Identity=44.0734557595993, Blast_Score=509, Evalue=1e-145,
Organism=Drosophila melanogaster, GI24661270, Length=593, Percent_Identity=43.0016863406408, Blast_Score=502, Evalue=1e-142,
Organism=Drosophila melanogaster, GI21355589, Length=593, Percent_Identity=43.0016863406408, Blast_Score=502, Evalue=1e-142,
Organism=Drosophila melanogaster, GI116007184, Length=221, Percent_Identity=25.7918552036199, Blast_Score=71, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=221, Percent_Identity=25.7918552036199, Blast_Score=71, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 67883; Mature: 67883

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS00018 EF_HAND_1 ; PS00052 RIBOSOMAL_S7 ; PS00198 4FE4S_FERREDOXIN ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKK
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCCHHHHH
CPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILA
CCHHHEEEECCCCHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH
GEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNELKIVHKIQYVEYASKFLKGTV
HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEECCH
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAA
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RVGINNFLKGYLPAENMKIRPDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVV
HCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE
DNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNYDGT
ECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCCCCCCCCH
VQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEHHCCCCE
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKA
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCEEEEEECCCCCC
GLATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MRVAVINYDFCKPDKCNLECINFCPVDRSGGKAIELSEIVKGKPVIYEETCIGCGICVKK
CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEECCCCCCCHHHHH
CPYEAISIVNLPDELEGEVIHRYKVNGFKLFGLPTPKNNTILGVLGKNGVGKTTVLKILA
CCHHHEEEECCCCHHCCCEEEEEEECCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHH
GEIIPNFGDPNSKVGKDEVLKRFRGKEIYNYFKELYSNELKIVHKIQYVEYASKFLKGTV
HHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
NEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDEPS
HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCEEEEECCH
SYLDVRERMNMAKAIRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAA
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RVGINNFLKGYLPAENMKIRPDEIKFMLKEVSDLDLSKDLKTKMKWTKIIKKLGDFQLVV
HCCHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEE
DNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKPQRIFPNYDGT
ECCCCCCCCEEEEECCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHCCCCCCCCCCCCCH
VQQYLENASKDALSTSSWFFEEVTKRLNLHRLLESNVNDLSGGELQKLYIAATLAKEADL
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEHHCCCCE
YVLDEPSSYLDVEERYIVAKAIKRVTRERKAVTFIIDHDLSIHDYIADRIIVFKGEPEKA
EEEECCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCEEEEEECCCCCC
GLATSPVTLKTGMNEFLRELEVTFRRDAETGRPRVNKIGSYLDRVQKERGDYYSMVLSTQ
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]