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The map label for this gene is 15897146

Identifier: 15897146

GI number: 15897146

Start: 167915

End: 169744

Strand: Direct

Name: 15897146

Synonym: SSO0195

Alternate gene names: NA

Gene position: 167915-169744 (Clockwise)

Preceding gene: 15897141

Following gene: 15897147

Centisome position: 5.61

GC content: 30.71

Gene sequence:

>1830_bases
ATGAGTTCTCAGAATATAAAATTACAGAGAAAAAACAGTATGACTTACTTTGATTTAATAGCGTGGATTACAGAAAATAA
GAAAGCGATAGAGGGATGTATAATAGATAACGTTTTCTTGATACAAAATACTCAAAATACATATATTTTAAAGTTACATT
GCAGTGGAAGAGACCAAGAATTAATAATAGAACCAAGTAAACGAATAAATATAACAAAATACAATTATCCAAAAATTTCT
TCAACAAAAATAACCGAATTAAGAAGATTAATTAGAGGAGATATAATTACGAATATGTATGTATTGAACAAGGAAAGAAT
ATTAATCCTAAAACTCAAAAGGGATGATAAAAAGGTAATAGTAGAACTACTACCTAGAGGAGTTTTGGTAATAGCAGATA
AAGATGGTAAAATCTTGTTTGCGAGTGAATATAAAGAGTTTAAAGATAGACTCATAAGAATAGGGGAGATATATAAACCT
CCACCTTCAATTGAACCTAATATAGATGAAATAGAAAAATTGATTAAGAAAGGAAACATAGCGAAAGGTTTAGGAATCCC
ACAAGAAGTAGCAAACTATCTTAGCTTACAAGACTCTACACCAGATATTAACGTAATAAGGGAAAAGATAAGAAATTTAG
AGATTTCAATAATTAATGGAGAGATAAAACCATGTCTCGTAGAAGATACAACTGTAGTACCTTTTTATCTTGACGGATGC
AAAGAATATCAAAGATTTAATGATGCAATAGACGATTATTTCTACACTATAACTCAAAAAGAGCTATCTGAAAAAACTTC
CAAAAAAATCTCAGAAGAGAAGCAGAAGATTATAGCCACAATTAAGCAAATAGAGGATAGTATAAAGGATTATGAAGACA
AAGAAAATAACTATAGACAACTAGGCAATTTTATACTTTCAAAGGCATACGAAATAGACCAGTTGTTGTTAAATAATAGA
GCAAAAAGTAAAAAGGTAAAGCTTAATGTAGATGGAGTTGAAATTGAATTAGATACCTCACTCTCAGCTACTAAAAACGC
AATGAGATTTTTTGATGAAGCTAAGGAATATAAGAGAAAAATAGAAAGAGCCCTTAAAAGTTTAGAAGAACTAAAAGAAA
AACTGGCTAAAATAGAGAAACAAGAAATAGAGAAACAAAACGAGATAAAACTAACGCTAAGGAAAAAGGAATGGTATGAG
AAATATAGATGGAGTATTTCAAGAAGCGGATATTTAATAATTTTAGGAAGAGATGCAAGTCAAAATGAAAGTATAGTTAA
AAAATACCTAAGGGACAAAGATATATTCTTGCATGCGGATATTATAGGCGCTCCAGCCACAATCATCATAACACAAGATA
ATAAGACAATCTCTGAAGAAGATATCTATGATGCAGCAGTTATGGCTGCGAGCTACTCAAAGGCTTGGAAAGTAGGTTTA
GCATCTGTTGACATATTTTGGGTTTTAGGCAATCAAGTCTCTAAATCACCGCCAAGTGGAGAATACTTGAATAAAGGTTC
ATTCATGATTTATGGAAAAAAGAATTTCATAAAAAACGTCAAACTACAATTAGCAATAGGCCTTATACTAAGTGAAAACG
GTGTATCAGTAATAGTGGGAAGTGAGGAAACCATTTCGGCTAAGACTAAATACTATGTTGTCATAGCTCCAGGTGATGAT
GATAAAGAGAGAATAACCCAAAAAATTATAAAAGTGTTTAGTAGAGCTTTACCAGAAATAAACGGATTGAACGCATTAAA
AACAGAGATTGAAGATAAAATTCCGGGAAAGAGCAAGATAGTTAAGACAAGTATAACATATAATAGTTAA

Upstream 100 bases:

>100_bases
TAAATTGATGAATAAAATAGTGTTGAGATAGCTCCAGCTATAACTCCCACAATGCCTCGCATAATTAATATTTTATCTTC
TACTTCCACATTTCTAATGA

Downstream 100 bases:

>100_bases
AACTAATATAAAATAAGAATGAGACTTTCACTAGCGGAGAAAGCATCACTAGTGAGACCTTTCGACTATATATTATTAAA
AACGATATATGGTCTTAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MSSQNIKLQRKNSMTYFDLIAWITENKKAIEGCIIDNVFLIQNTQNTYILKLHCSGRDQELIIEPSKRINITKYNYPKIS
STKITELRRLIRGDIITNMYVLNKERILILKLKRDDKKVIVELLPRGVLVIADKDGKILFASEYKEFKDRLIRIGEIYKP
PPSIEPNIDEIEKLIKKGNIAKGLGIPQEVANYLSLQDSTPDINVIREKIRNLEISIINGEIKPCLVEDTTVVPFYLDGC
KEYQRFNDAIDDYFYTITQKELSEKTSKKISEEKQKIIATIKQIEDSIKDYEDKENNYRQLGNFILSKAYEIDQLLLNNR
AKSKKVKLNVDGVEIELDTSLSATKNAMRFFDEAKEYKRKIERALKSLEELKEKLAKIEKQEIEKQNEIKLTLRKKEWYE
KYRWSISRSGYLIILGRDASQNESIVKKYLRDKDIFLHADIIGAPATIIITQDNKTISEEDIYDAAVMAASYSKAWKVGL
ASVDIFWVLGNQVSKSPPSGEYLNKGSFMIYGKKNFIKNVKLQLAIGLILSENGVSVIVGSEETISAKTKYYVVIAPGDD
DKERITQKIIKVFSRALPEINGLNALKTEIEDKIPGKSKIVKTSITYNS

Sequences:

>Translated_609_residues
MSSQNIKLQRKNSMTYFDLIAWITENKKAIEGCIIDNVFLIQNTQNTYILKLHCSGRDQELIIEPSKRINITKYNYPKIS
STKITELRRLIRGDIITNMYVLNKERILILKLKRDDKKVIVELLPRGVLVIADKDGKILFASEYKEFKDRLIRIGEIYKP
PPSIEPNIDEIEKLIKKGNIAKGLGIPQEVANYLSLQDSTPDINVIREKIRNLEISIINGEIKPCLVEDTTVVPFYLDGC
KEYQRFNDAIDDYFYTITQKELSEKTSKKISEEKQKIIATIKQIEDSIKDYEDKENNYRQLGNFILSKAYEIDQLLLNNR
AKSKKVKLNVDGVEIELDTSLSATKNAMRFFDEAKEYKRKIERALKSLEELKEKLAKIEKQEIEKQNEIKLTLRKKEWYE
KYRWSISRSGYLIILGRDASQNESIVKKYLRDKDIFLHADIIGAPATIIITQDNKTISEEDIYDAAVMAASYSKAWKVGL
ASVDIFWVLGNQVSKSPPSGEYLNKGSFMIYGKKNFIKNVKLQLAIGLILSENGVSVIVGSEETISAKTKYYVVIAPGDD
DKERITQKIIKVFSRALPEINGLNALKTEIEDKIPGKSKIVKTSITYNS
>Mature_608_residues
SSQNIKLQRKNSMTYFDLIAWITENKKAIEGCIIDNVFLIQNTQNTYILKLHCSGRDQELIIEPSKRINITKYNYPKISS
TKITELRRLIRGDIITNMYVLNKERILILKLKRDDKKVIVELLPRGVLVIADKDGKILFASEYKEFKDRLIRIGEIYKPP
PSIEPNIDEIEKLIKKGNIAKGLGIPQEVANYLSLQDSTPDINVIREKIRNLEISIINGEIKPCLVEDTTVVPFYLDGCK
EYQRFNDAIDDYFYTITQKELSEKTSKKISEEKQKIIATIKQIEDSIKDYEDKENNYRQLGNFILSKAYEIDQLLLNNRA
KSKKVKLNVDGVEIELDTSLSATKNAMRFFDEAKEYKRKIERALKSLEELKEKLAKIEKQEIEKQNEIKLTLRKKEWYEK
YRWSISRSGYLIILGRDASQNESIVKKYLRDKDIFLHADIIGAPATIIITQDNKTISEEDIYDAAVMAASYSKAWKVGLA
SVDIFWVLGNQVSKSPPSGEYLNKGSFMIYGKKNFIKNVKLQLAIGLILSENGVSVIVGSEETISAKTKYYVVIAPGDDD
KERITQKIIKVFSRALPEINGLNALKTEIEDKIPGKSKIVKTSITYNS

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=251, Percent_Identity=33.4661354581673, Blast_Score=142, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI32565397, Length=202, Percent_Identity=39.1089108910891, Blast_Score=154, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6325248, Length=217, Percent_Identity=24.4239631336406, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI281362530, Length=200, Percent_Identity=40.5, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281362528, Length=200, Percent_Identity=40.5, Blast_Score=151, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 69903; Mature: 69772

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSQNIKLQRKNSMTYFDLIAWITENKKAIEGCIIDNVFLIQNTQNTYILKLHCSGRDQE
CCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHEEECCEEEEEECCCEEEEEEEECCCCCE
LIIEPSKRINITKYNYPKISSTKITELRRLIRGDIITNMYVLNKERILILKLKRDDKKVI
EEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCHHHH
VELLPRGVLVIADKDGKILFASEYKEFKDRLIRIGEIYKPPPSIEPNIDEIEKLIKKGNI
HHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
AKGLGIPQEVANYLSLQDSTPDINVIREKIRNLEISIINGEIKPCLVEDTTVVPFYLDGC
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCEEEEEEEHHH
KEYQRFNDAIDDYFYTITQKELSEKTSKKISEEKQKIIATIKQIEDSIKDYEDKENNYRQ
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGNFILSKAYEIDQLLLNNRAKSKKVKLNVDGVEIELDTSLSATKNAMRFFDEAKEYKRK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IERALKSLEELKEKLAKIEKQEIEKQNEIKLTLRKKEWYEKYRWSISRSGYLIILGRDAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHEECCCCEEEEEECCCC
QNESIVKKYLRDKDIFLHADIIGAPATIIITQDNKTISEEDIYDAAVMAASYSKAWKVGL
CCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ASVDIFWVLGNQVSKSPPSGEYLNKGSFMIYGKKNFIKNVKLQLAIGLILSENGVSVIVG
EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCEEEEEEEEEEEECCCCEEEEC
SEETISAKTKYYVVIAPGDDDKERITQKIIKVFSRALPEINGLNALKTEIEDKIPGKSKI
CCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
VKTSITYNS
EEEEEEECC
>Mature Secondary Structure 
SSQNIKLQRKNSMTYFDLIAWITENKKAIEGCIIDNVFLIQNTQNTYILKLHCSGRDQE
CCCCEEEEECCCCHHHHHHHHHHCCCHHHHHEEECCEEEEEECCCEEEEEEEECCCCCE
LIIEPSKRINITKYNYPKISSTKITELRRLIRGDIITNMYVLNKERILILKLKRDDKKVI
EEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCEEEEEEECCCCHHHH
VELLPRGVLVIADKDGKILFASEYKEFKDRLIRIGEIYKPPPSIEPNIDEIEKLIKKGNI
HHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC
AKGLGIPQEVANYLSLQDSTPDINVIREKIRNLEISIINGEIKPCLVEDTTVVPFYLDGC
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEEEECCEEEEEEEHHH
KEYQRFNDAIDDYFYTITQKELSEKTSKKISEEKQKIIATIKQIEDSIKDYEDKENNYRQ
HHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGNFILSKAYEIDQLLLNNRAKSKKVKLNVDGVEIELDTSLSATKNAMRFFDEAKEYKRK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHH
IERALKSLEELKEKLAKIEKQEIEKQNEIKLTLRKKEWYEKYRWSISRSGYLIILGRDAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHEECCCCEEEEEECCCC
QNESIVKKYLRDKDIFLHADIIGAPATIIITQDNKTISEEDIYDAAVMAASYSKAWKVGL
CCHHHHHHHHCCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCC
ASVDIFWVLGNQVSKSPPSGEYLNKGSFMIYGKKNFIKNVKLQLAIGLILSENGVSVIVG
EEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECHHHHHCEEEEEEEEEEEECCCCEEEEC
SEETISAKTKYYVVIAPGDDDKERITQKIIKVFSRALPEINGLNALKTEIEDKIPGKSKI
CCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
VKTSITYNS
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]