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The map label for this gene is dcd [H]

Identifier: 15897141

GI number: 15897141

Start: 164314

End: 164934

Strand: Direct

Name: dcd [H]

Synonym: SSO0190

Alternate gene names: 15897141

Gene position: 164314-164934 (Clockwise)

Preceding gene: 15897138

Following gene: 15897146

Centisome position: 5.49

GC content: 35.27

Gene sequence:

>621_bases
TTGCTGGATAGTCCAATACATGTAGGCAATGTGGTTTTAACCCTTTTCAACTACAATATTTTAGATATGATTCTATCTGA
TAGGGATTTGAAGTATTATTTAGAGAAGAGCTGGATAAAAATCCAGCCTTTAAGGGAGGATACGATAAGGGAAAATGGAG
TTGATTTGAGAGTAGGTAATGAAATAGCTAGGTTCAAAAAAACGGATAAGATCTTTGATCCTGATAATCCTGATCCTTCG
TTCTTCCAAACGGAGAAAGGAGAGGAGTTTATAATCCAACCTTATGAGCATGTACTACTAACGACTGAAGAATATATAGA
GTTAAATAATGATGTAATGGCTTTCGTAAATCTAAGGTCAACATTTGCTAGATTAGGTTTATTTATCCCACCTACAATAG
TCGATGCTGGATTTAAAGGACAAGTAACAATAGAAGTAGTGGGCTCATCTTTCCCTGTAAAATTAAAGAGAAGCACACGT
TTTATTCACTTGATCTTTGCCAGAACGCTCACACCAGTTGAATATCCGTACCAAGGAAAATATCAAGGGCAAAAAGGCGT
TACATTACCCAAATTTAACTCACAAATTTCCAGCTTTTACTATCAGCATCAAAGTATATAA

Upstream 100 bases:

>100_bases
TATTAACTATAGATACTTAGAATAATAATACTACTCAAAAACAATGGTTATATCATTCTGAAAAGATATTTTCGCTCTAT
ACAGTTTCTCATAAATAAAA

Downstream 100 bases:

>100_bases
CACTATATTGCCTGAGTTTCTGGAATAATTTGTATTCTTGTTTTGTCAGATATTTTTGAACTTCTATCTCATCTGAAGTA
GAAATATTGGCAATTTTCTT

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLDSPIHVGNVVLTLFNYNILDMILSDRDLKYYLEKSWIKIQPLREDTIRENGVDLRVGNEIARFKKTDKIFDPDNPDPS
FFQTEKGEEFIIQPYEHVLLTTEEYIELNNDVMAFVNLRSTFARLGLFIPPTIVDAGFKGQVTIEVVGSSFPVKLKRSTR
FIHLIFARTLTPVEYPYQGKYQGQKGVTLPKFNSQISSFYYQHQSI

Sequences:

>Translated_206_residues
MLDSPIHVGNVVLTLFNYNILDMILSDRDLKYYLEKSWIKIQPLREDTIRENGVDLRVGNEIARFKKTDKIFDPDNPDPS
FFQTEKGEEFIIQPYEHVLLTTEEYIELNNDVMAFVNLRSTFARLGLFIPPTIVDAGFKGQVTIEVVGSSFPVKLKRSTR
FIHLIFARTLTPVEYPYQGKYQGQKGVTLPKFNSQISSFYYQHQSI
>Mature_206_residues
MLDSPIHVGNVVLTLFNYNILDMILSDRDLKYYLEKSWIKIQPLREDTIRENGVDLRVGNEIARFKKTDKIFDPDNPDPS
FFQTEKGEEFIIQPYEHVLLTTEEYIELNNDVMAFVNLRSTFARLGLFIPPTIVDAGFKGQVTIEVVGSSFPVKLKRSTR
FIHLIFARTLTPVEYPYQGKYQGQKGVTLPKFNSQISSFYYQHQSI

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=192, Percent_Identity=28.6458333333333, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR008180 [H]

Pfam domain/function: PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 23878; Mature: 23878

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSPIHVGNVVLTLFNYNILDMILSDRDLKYYLEKSWIKIQPLREDTIRENGVDLRVGN
CCCCCCCHHHEEEEECCCHHHHHHHCCCCCEEEEECCCEEEECCCHHHHHCCCCEEEECC
EIARFKKTDKIFDPDNPDPSFFQTEKGEEFIIQPYEHVLLTTEEYIELNNDVMAFVNLRS
HHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCHHEEECCHHHHCCCCCEEEEEEHHH
TFARLGLFIPPTIVDAGFKGQVTIEVVGSSFPVKLKRSTRFIHLIFARTLTPVEYPYQGK
HHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEEHHCCCCCCCCCCC
YQGQKGVTLPKFNSQISSFYYQHQSI
CCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDSPIHVGNVVLTLFNYNILDMILSDRDLKYYLEKSWIKIQPLREDTIRENGVDLRVGN
CCCCCCCHHHEEEEECCCHHHHHHHCCCCCEEEEECCCEEEECCCHHHHHCCCCEEEECC
EIARFKKTDKIFDPDNPDPSFFQTEKGEEFIIQPYEHVLLTTEEYIELNNDVMAFVNLRS
HHHHHHCCCCCCCCCCCCCCCEECCCCCEEEECCCHHEEECCHHHHCCCCCEEEEEEHHH
TFARLGLFIPPTIVDAGFKGQVTIEVVGSSFPVKLKRSTRFIHLIFARTLTPVEYPYQGK
HHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEEHHCCCCCCCCCCC
YQGQKGVTLPKFNSQISSFYYQHQSI
CCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]