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The map label for this gene is 15897095

Identifier: 15897095

GI number: 15897095

Start: 115476

End: 117074

Strand: Reverse

Name: 15897095

Synonym: SSO0140

Alternate gene names: NA

Gene position: 117074-115476 (Counterclockwise)

Preceding gene: 15897097

Following gene: 15897094

Centisome position: 3.91

GC content: 37.4

Gene sequence:

>1599_bases
TTGAGTAAAATTGGTGAAACACCACTGGACATGGGGTTAAAAGATGCGATTATAGGAATTTTCATATGGAATAAGGAAAA
GGGAATCTTTGAACCTTTTGAGAACAGACTGAGGAAAAAAGCACGTGCGTTACTTGAATATTATACTGATTTAGCTAATG
ATGAGCTAAAGCCGTATGTGATAAGCAAAACAATTATCGATAATGTAGTAGATGAGATCAAAGATAAGACATTAATACCG
TTACCAAACGAACCATTACGCGTGGCGTTTCCCAATTGCACATTAGAGTGGAAGATATCGCACGGGCGATATGTACCATC
TTTTGTTCTTGCTGAGGAAAGAACACCAGAACATTTCGCATTTCATTATATTCCGCATAAGATTCACCTGGAAGAGTTGG
TCAAAATTAATGAAGAAGTTCTTAGCGCACGTGATATACCAATAGATTTGATAGAAGATTTAGCACGGCGGTTGTGTCCG
AAAAGCCTGGAAGTGTTCAAACAGTGGGCGAATGAGAAATGGGTTACATTGTTTGAAATTATAGGTTATACATTATTTCC
AAAGATAGAGTTTAGAAAAGCCTTTATGATTTTAGGACCAAGAGGCACCGGCAAATCCACTTTCATCAATCTAATAAAGA
AGTTACTAGGGCGTGGTAATGTAGTGAATATTCCACTACATATATTATTTGGAGATAAAAATCGATTCGTGTTAGCTGAA
TTATACCATAAGTTGGTTAATGCTGTAAGCGAAACAAAGGAGTACAACCTAGACGATATGGATACTCTTAAGGTACTAAC
GGGCGGTGATCGGATCACGGCGGATGTAAAGTTCAAAGACCCTATAACTTTCACTCCTTACGCAAAGTTAGTTATTGCAT
CAAATAAGCCACCAACAATAAGAGATAAAAACGACATGGCATTTTGGCACAGATGGTTGATTATCGAATTTCCTAACCAA
TTTGAAGACAACACGGCGTGGGGGGATAAAACATTCACTGAAGATGAGTTAGAGGGTATTCTAACGGTTTCAATTTTGGC
ATTTAGTAGAGTGTTGTTACATGGGAAGTTTGACTTTGAGCAGACAGAGGAAGAGGTTAGAGGAATATGGCTTTCAACAA
TTGATTATGTGTACAAGTTTGTGAAAGAGAAGCTAAAGCACGGTGAAATTATGATAACTAAAAACGCTGATGATTATGTT
AGAGTCAAAGAATTGTACAGAATGTATCTGGAGTATTGTTCTACGAATGGCTATAATGCCACAACGTATAAAGGTTTCGT
GAGAAGACTCAGGGACTATTTCAACTTAACTGTAGTAATGAAAAACGTAGAAGGAAAGAGATTCAGAGCAGTAGTAGGTA
TCAAAATTAACACAGTACAAACAAATGAAACCACGGGTGGTGATTATGGGGAATTCCTTAACTACATCTTGAAGAACAAT
CACATGATTAAGGAATTCGCTGATCTGGTCAGGGATTTCGGAAGTACTGAAAAGGCTAATGTGTTTATAGATTTCTGCAC
GAAGAAGAACATGTGTTTTAGCCGTGGTATAGATGCATGGGAAATATCTATCCAACCACGGGGGTTTAGTTTTTTATAA

Upstream 100 bases:

>100_bases
TCTTCAACAAATATGAAAATTTTTTGCTTCTTGTGTTGAAATAAGCCGATTTTTCTAACTCCGCTCTGATATTTTTCTCT
TCCATAGAAATTGTATCATT

Downstream 100 bases:

>100_bases
TTGAATTTTTATACTGTCATGTACATTTAAGGTTACAAAGTCACTCAATTTTTCTTTTTTTACCCTATAACACGGCGTGT
TTTTTGTGTTAAATAATAAT

Product: primase (carboxy-end fragment)

Products: NA

Alternate protein names: Primase; P4 Family Phage/Plasmid Primase; DNA Primase; Phage/Plasmid Primase; DNA Primase/Helicase; Phage Primase; RepA Protein; Phage DNA Primase; Phage/Plasmid DNA Primase; P4-Specific DNA Primase; Helicase-Like Protein; Phage/Plasmid Primase P4-Like Protein; Plasmid/Phage Primase; Phage/Plasmid Primase P4 C-Terminal Protein; Nucleoside Triphosphatase D5 Family

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYVISKTIIDNVVDEIKDKTLIP
LPNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFAFHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCP
KSLEVFKQWANEKWVTLFEIIGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAE
LYHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTIRDKNDMAFWHRWLIIEFPNQ
FEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFEQTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYV
RVKELYRMYLEYCSTNGYNATTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNN
HMIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL

Sequences:

>Translated_532_residues
MSKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYVISKTIIDNVVDEIKDKTLIP
LPNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFAFHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCP
KSLEVFKQWANEKWVTLFEIIGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAE
LYHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTIRDKNDMAFWHRWLIIEFPNQ
FEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFEQTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYV
RVKELYRMYLEYCSTNGYNATTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNN
HMIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL
>Mature_531_residues
SKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYVISKTIIDNVVDEIKDKTLIPL
PNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFAFHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCPK
SLEVFKQWANEKWVTLFEIIGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAEL
YHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTIRDKNDMAFWHRWLIIEFPNQF
EDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFEQTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYVR
VKELYRMYLEYCSTNGYNATTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNNH
MIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61911; Mature: 61780

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYV
CCCCCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ISKTIIDNVVDEIKDKTLIPLPNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFA
HHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCEEEEEECCCCCCCCEEEECCCCCCCEE
FHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCPKSLEVFKQWANEKWVTLFEI
EEECCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH
IGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAE
HHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEHHH
LYHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTI
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCEEECCCEEEEEECCCCCCC
RDKNDMAFWHRWLIIEFPNQFEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFE
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
QTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYVRVKELYRMYLEYCSTNGYNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
TTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNN
HHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCC
HMIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
SKIGETPLDMGLKDAIIGIFIWNKEKGIFEPFENRLRKKARALLEYYTDLANDELKPYV
CCCCCCCCCCCCHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
ISKTIIDNVVDEIKDKTLIPLPNEPLRVAFPNCTLEWKISHGRYVPSFVLAEERTPEHFA
HHHHHHHHHHHHHCCCEECCCCCCCCEEEECCCEEEEEECCCCCCCCEEEECCCCCCCEE
FHYIPHKIHLEELVKINEEVLSARDIPIDLIEDLARRLCPKSLEVFKQWANEKWVTLFEI
EEECCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH
IGYTLFPKIEFRKAFMILGPRGTGKSTFINLIKKLLGRGNVVNIPLHILFGDKNRFVLAE
HHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEHHH
LYHKLVNAVSETKEYNLDDMDTLKVLTGGDRITADVKFKDPITFTPYAKLVIASNKPPTI
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEEEECCCEEECCCEEEEEECCCCCCC
RDKNDMAFWHRWLIIEFPNQFEDNTAWGDKTFTEDELEGILTVSILAFSRVLLHGKFDFE
CCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
QTEEEVRGIWLSTIDYVYKFVKEKLKHGEIMITKNADDYVRVKELYRMYLEYCSTNGYNA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCC
TTYKGFVRRLRDYFNLTVVMKNVEGKRFRAVVGIKINTVQTNETTGGDYGEFLNYILKNN
HHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCC
HMIKEFADLVRDFGSTEKANVFIDFCTKKNMCFSRGIDAWEISIQPRGFSFL
CHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA