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The map label for this gene is 15893271

Identifier: 15893271

GI number: 15893271

Start: 1250575

End: 1251225

Strand: Reverse

Name: 15893271

Synonym: RC1348

Alternate gene names: NA

Gene position: 1251225-1250575 (Counterclockwise)

Preceding gene: 15893272

Following gene: 15893270

Centisome position: 98.62

GC content: 28.26

Gene sequence:

>651_bases
TTGAATAGCTATCAAAAGATAATAGAGGGGGCAAAACAGATAATAGATAATTGGCATCCTTATTTTGAAATAAATAAACA
ATGGGAAATTGTTAAATTTGGCGATATCGTTATCAATAAATTAAAAAGTAATATTTTATCTCTTGAGCATAAGGAGTATA
CAACATTAATAGTAGGTAAAAAAGGTAAAATGATTAACATTAATACTGCAATTAAGGGGGATATTCCAGTAATAGCATCT
GGTCGGGTTAGTCCTTATTCACATAATCAATATAATTTTAACGGTAACATAATCACTATTTCTTCATCGGGAGCATATGC
TGGATATATTTGGTATCATAATTCACCAATGTGGACTTCAGATTGTAACGTAATCTATTCAATTAATGAAAAACTATTGT
TAACTAAATATCTATATTATATTTTAAAATCTCAGCAAAATATAATATACCAAAAGCAAGTTGGATCAGGTCAACCTCAC
GTTTATTTGAAAGATTTAGAGGATTTACAAATTCCTATCCCGCCTCTTGAAGAACAGCAAAAAATGGTAACAGAGCTTGA
TAATAATCAAAGTAAGATTGACAACCTTAAAAACTATATAAAACAATTTGAAAACAAACTAAAAACCACATTAAATTCTC
TTTGGCAATAA

Upstream 100 bases:

>100_bases
TTATAATAAAGGTGCTCAGCCTGGTTTAAATAGAGAACATATAAACTCAATTTATATTCCTCTTCTGTCTCTAGAAAAAC
AACAGAAAATTATTGAAGAA

Downstream 100 bases:

>100_bases
TTGATGTACATTAACTACTTAAAAGATTTGATTGGTTTTAAGTCTGTAACTCCTAAGAGCGATGGGGCTATTGAGTATAT
TAATGATTTGCTTAAACAGC

Product: putative type I restriction enzyme S subunit

Products: NA

Alternate protein names: Restriction System DNA Specificity Subunit; Restriction System DNA Specificity Domain Protein; Type I R-M System S Protein; Type I Restriction- Methylase; Type I Restriction S Subunit; Type I Restriction System Specificity Protein; Type I Restriction; Type I Restriction Specificity Protein HsdS; Type I Restriction- Specificity Subunit; N-6 DNA Methylase

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEHKEYTTLIVGKKGKMININTAIKGDIPVIAS
GRVSPYSHNQYNFNGNIITISSSGAYAGYIWYHNSPMWTSDCNVIYSINEKLLLTKYLYYILKSQQNIIYQKQVGSGQPH
VYLKDLEDLQIPIPPLEEQQKMVTELDNNQSKIDNLKNYIKQFENKLKTTLNSLWQ

Sequences:

>Translated_216_residues
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEHKEYTTLIVGKKGKMININTAIKGDIPVIAS
GRVSPYSHNQYNFNGNIITISSSGAYAGYIWYHNSPMWTSDCNVIYSINEKLLLTKYLYYILKSQQNIIYQKQVGSGQPH
VYLKDLEDLQIPIPPLEEQQKMVTELDNNQSKIDNLKNYIKQFENKLKTTLNSLWQ
>Mature_216_residues
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEHKEYTTLIVGKKGKMININTAIKGDIPVIAS
GRVSPYSHNQYNFNGNIITISSSGAYAGYIWYHNSPMWTSDCNVIYSINEKLLLTKYLYYILKSQQNIIYQKQVGSGQPH
VYLKDLEDLQIPIPPLEEQQKMVTELDNNQSKIDNLKNYIKQFENKLKTTLNSLWQ

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25095; Mature: 25095

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEHKEYTTLIVGK
CCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEC
KGKMININTAIKGDIPVIASGRVSPYSHNQYNFNGNIITISSSGAYAGYIWYHNSPMWTS
CCCEEEECEEECCCCCEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEECCCCCCC
DCNVIYSINEKLLLTKYLYYILKSQQNIIYQKQVGSGQPHVYLKDLEDLQIPIPPLEEQQ
CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH
KMVTELDNNQSKIDNLKNYIKQFENKLKTTLNSLWQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSYQKIIEGAKQIIDNWHPYFEINKQWEIVKFGDIVINKLKSNILSLEHKEYTTLIVGK
CCHHHHHHHHHHHHHHCCCCEEEECCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEEEC
KGKMININTAIKGDIPVIASGRVSPYSHNQYNFNGNIITISSSGAYAGYIWYHNSPMWTS
CCCEEEECEEECCCCCEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEECCCCCCC
DCNVIYSINEKLLLTKYLYYILKSQQNIIYQKQVGSGQPHVYLKDLEDLQIPIPPLEEQQ
CCCEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCHHHH
KMVTELDNNQSKIDNLKNYIKQFENKLKTTLNSLWQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA