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The map label for this gene is 15893062

Identifier: 15893062

GI number: 15893062

Start: 1052789

End: 1053163

Strand: Reverse

Name: 15893062

Synonym: RC1139

Alternate gene names: NA

Gene position: 1053163-1052789 (Counterclockwise)

Preceding gene: 15893064

Following gene: 15893060

Centisome position: 83.01

GC content: 30.67

Gene sequence:

>375_bases
TTGATGCACCATAAAAAGCTTGATAAGTGGCTTCAACCAGGCGGTCATTGTGATGGAGATAGTAATATATTAAATGTAGC
GGTTAAAGAAGCTATAGAAGAATCCGGAATTAATGAAATCAAAACGATAAATAAGGAGATTTTTGATATAGACACCCATT
ATATTCCGCGAACTCATAAGGAGCCTGCTCATTATCACTATGATGTACGATTTTTACTAAAAACAGTAAATAATGATAAT
TTTATAAAAAATAACGAATCGAATGAACTTAAATGGTTTAACTTTTCTGATTATTCAAAATTAGCTATTGAGCTAGAACG
TTCTGTTACTAGAATGATAGAAAAGTTTATGACAATTAACCATCCTGCTTGTTAA

Upstream 100 bases:

>100_bases
ATTTTTAAATGAATATGAAAACCCTTTTAGCTGAGATTTACAAATAGGACATTTCACTGCTTCGGCTTTTTTACTTAATA
ATGATAAAACTAAATTTTTA

Downstream 100 bases:

>100_bases
ATATAAATTATTGCTCTATAATAAATAGCGTTTTTTAAATAAAATGTAAATCAAATGCCATCATCTAGAATTTTTTCATT
CCGTAGTAAGAACAAGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: Nudix Hydrolase; (Di)Nucleoside Polyphosphate Hydrolase-Like Protein; Nudix Hydrolase Family Protein; NUDIX Family Hydrolase; (Di)Nucleoside Polyphosphate Hydrolase; Hydrolase Nudix; NUDIX Family Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MMHHKKLDKWLQPGGHCDGDSNILNVAVKEAIEESGINEIKTINKEIFDIDTHYIPRTHKEPAHYHYDVRFLLKTVNNDN
FIKNNESNELKWFNFSDYSKLAIELERSVTRMIEKFMTINHPAC

Sequences:

>Translated_124_residues
MMHHKKLDKWLQPGGHCDGDSNILNVAVKEAIEESGINEIKTINKEIFDIDTHYIPRTHKEPAHYHYDVRFLLKTVNNDN
FIKNNESNELKWFNFSDYSKLAIELERSVTRMIEKFMTINHPAC
>Mature_124_residues
MMHHKKLDKWLQPGGHCDGDSNILNVAVKEAIEESGINEIKTINKEIFDIDTHYIPRTHKEPAHYHYDVRFLLKTVNNDN
FIKNNESNELKWFNFSDYSKLAIELERSVTRMIEKFMTINHPAC

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14616; Mature: 14616

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHHKKLDKWLQPGGHCDGDSNILNVAVKEAIEESGINEIKTINKEIFDIDTHYIPRTHK
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
EPAHYHYDVRFLLKTVNNDNFIKNNESNELKWFNFSDYSKLAIELERSVTRMIEKFMTIN
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
HPAC
CCCC
>Mature Secondary Structure
MMHHKKLDKWLQPGGHCDGDSNILNVAVKEAIEESGINEIKTINKEIFDIDTHYIPRTHK
CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
EPAHYHYDVRFLLKTVNNDNFIKNNESNELKWFNFSDYSKLAIELERSVTRMIEKFMTIN
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
HPAC
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA