Definition Rickettsia conorii str. Malish 7, complete genome.
Accession NC_003103
Length 1,268,755

Click here to switch to the map view.

The map label for this gene is 15893038

Identifier: 15893038

GI number: 15893038

Start: 1037237

End: 1037806

Strand: Reverse

Name: 15893038

Synonym: RC1115

Alternate gene names: NA

Gene position: 1037806-1037237 (Counterclockwise)

Preceding gene: 15893042

Following gene: 15893032

Centisome position: 81.8

GC content: 23.86

Gene sequence:

>570_bases
ATGAAGTTAAAAGAATATTTTAAAAAGTTAGAAAGTACAGCTTTTGGTCCGTGGCTTGCTGCATTTAAAAAATTATTTAG
TAAAGAGGCATTAGAAGAGGAAATACTGAATATAAAACTAAAGGAATCTGAAAAGCAAGAGGTTAATAAAAAAGATTTAG
TTATTTTATCTAATAATGTTATTGAAATTGGACAAAAAGATACAATAGCGCATGAAATTTCAAGAGTTAACCAATATAAA
GAAAATATAGGTTTGGTATTTACTCTAATTACCAATATTCAATTAGAAAAATTTGCAGAATTTATCTCTAATTTACCGAA
AAAACATAGTGAATTTAAGGATTACTTTCGTAGTGAAGAACAAAAAGATGGGTTTTTTAAAGAAGATGCTTATAAAAAAG
TTGTTAATAAAGGTAAATTAGTTGAAAAATTCCAAAACTCATATAAATATAATTATGAAAAAATAGAACAAAATGTTCAT
GAATTACAAGCTTATTTAGATTCATATGAATATAATTCTGGTATTCTTAAATCTGATTTATTAAGGCATGATTATTATCA
TAATGCATAA

Upstream 100 bases:

>100_bases
AATTTTTACAAAAGTATTAATTTTTCTTAGCTCTATAACTTGATTACTGTCAACTAGTACTATAAATTAAACTAAGAAAA
TATAAACAAGGAAATTAGTT

Downstream 100 bases:

>100_bases
ATTATTATGCTATCTATTTTAGAAGTAGCGGTTTCAATAAAAATCTTATTAATTTTCTTATGACAATATCTATAAATGAT
TTAAATTTAAGATATAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKLKEYFKKLESTAFGPWLAAFKKLFSKEALEEEILNIKLKESEKQEVNKKDLVILSNNVIEIGQKDTIAHEISRVNQYK
ENIGLVFTLITNIQLEKFAEFISNLPKKHSEFKDYFRSEEQKDGFFKEDAYKKVVNKGKLVEKFQNSYKYNYEKIEQNVH
ELQAYLDSYEYNSGILKSDLLRHDYYHNA

Sequences:

>Translated_189_residues
MKLKEYFKKLESTAFGPWLAAFKKLFSKEALEEEILNIKLKESEKQEVNKKDLVILSNNVIEIGQKDTIAHEISRVNQYK
ENIGLVFTLITNIQLEKFAEFISNLPKKHSEFKDYFRSEEQKDGFFKEDAYKKVVNKGKLVEKFQNSYKYNYEKIEQNVH
ELQAYLDSYEYNSGILKSDLLRHDYYHNA
>Mature_189_residues
MKLKEYFKKLESTAFGPWLAAFKKLFSKEALEEEILNIKLKESEKQEVNKKDLVILSNNVIEIGQKDTIAHEISRVNQYK
ENIGLVFTLITNIQLEKFAEFISNLPKKHSEFKDYFRSEEQKDGFFKEDAYKKVVNKGKLVEKFQNSYKYNYEKIEQNVH
ELQAYLDSYEYNSGILKSDLLRHDYYHNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22455; Mature: 22455

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKEYFKKLESTAFGPWLAAFKKLFSKEALEEEILNIKLKESEKQEVNKKDLVILSNNV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCE
IEIGQKDTIAHEISRVNQYKENIGLVFTLITNIQLEKFAEFISNLPKKHSEFKDYFRSEE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
QKDGFFKEDAYKKVVNKGKLVEKFQNSYKYNYEKIEQNVHELQAYLDSYEYNSGILKSDL
HCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRHDYYHNA
HHHHHCCCC
>Mature Secondary Structure
MKLKEYFKKLESTAFGPWLAAFKKLFSKEALEEEILNIKLKESEKQEVNKKDLVILSNNV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCE
IEIGQKDTIAHEISRVNQYKENIGLVFTLITNIQLEKFAEFISNLPKKHSEFKDYFRSEE
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
QKDGFFKEDAYKKVVNKGKLVEKFQNSYKYNYEKIEQNVHELQAYLDSYEYNSGILKSDL
HCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LRHDYYHNA
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA