| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15893032
Identifier: 15893032
GI number: 15893032
Start: 1030150
End: 1030623
Strand: Reverse
Name: 15893032
Synonym: RC1109
Alternate gene names: NA
Gene position: 1030623-1030150 (Counterclockwise)
Preceding gene: 15893038
Following gene: 15893031
Centisome position: 81.23
GC content: 27.64
Gene sequence:
>474_bases ATGAATATTGAATATAAAAAATTTGTGCATGAATATATGCTAGAATTTGTGAAAAAAATTCTAACAAAAATTCAGCATGA AAATTTATATTGGGATCAGTTAATATACATATCGTACAGAACCGATAATCCTGCAGTAATTTTACCTTCAAAAGTTAAAC AGGCATATCCGAAACAGATAACAATAGTACTGCAATATCAGTTTGAAAATTTAATAGTAAATGATACGGGCTTTTCTTTA ACGGTAAGTTTTGACGGTGTTAAAGAAATAATTTACGTACCTTTTGATGCACTTATTAGCTTTGTTGATTTCAATAATAA TTACAGTCTCACTTTTAATCAGTCGTTAAATATACATGAAAATCCTCAACATGAAGAGGCAATAAGTAATAATAAAAGTG ATCAGACTTCATCATCTTCAAGTCCAAATGTTATAATGTTAGATAAGTTTCGTAATTCTTCTAAACCTAGTTAA
Upstream 100 bases:
>100_bases ACTCCTGAGATTGTTTCGTCAAAACTTACAGTTTTTCCTTGCAATGACTTAAACTGTTCAAATTAAACTTCGTCGACTTA TTTTTATTTATTTTTCTCGT
Downstream 100 bases:
>100_bases TGCATATTATGGATTCAAAAGTAGTGATATATACTGATGGTGCATGTGCAGGTAATCCAGGTCCCGGAGGGTGGGGAGCT TTGCTTCAATTTAATGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MNIEYKKFVHEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQITIVLQYQFENLIVNDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHENPQHEEAISNNKSDQTSSSSSPNVIMLDKFRNSSKPS
Sequences:
>Translated_157_residues MNIEYKKFVHEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQITIVLQYQFENLIVNDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHENPQHEEAISNNKSDQTSSSSSPNVIMLDKFRNSSKPS >Mature_157_residues MNIEYKKFVHEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQITIVLQYQFENLIVNDTGFSL TVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHENPQHEEAISNNKSDQTSSSSSPNVIMLDKFRNSSKPS
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18297; Mature: 18297
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEYKKFVHEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECHHHHHCCCCEE TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHE EEEEEEEECEEEEECCCCEEEEEECCCEEEEEECHHHHEEEEECCCCEEEEECCCCCCCC NPQHEEAISNNKSDQTSSSSSPNVIMLDKFRNSSKPS CCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCC >Mature Secondary Structure MNIEYKKFVHEYMLEFVKKILTKIQHENLYWDQLIYISYRTDNPAVILPSKVKQAYPKQI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEECHHHHHCCCCEE TIVLQYQFENLIVNDTGFSLTVSFDGVKEIIYVPFDALISFVDFNNNYSLTFNQSLNIHE EEEEEEEECEEEEECCCCEEEEEECCCEEEEEECHHHHEEEEECCCCEEEEECCCCCCCC NPQHEEAISNNKSDQTSSSSSPNVIMLDKFRNSSKPS CCCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA