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The map label for this gene is 15892763

Identifier: 15892763

GI number: 15892763

Start: 792937

End: 793095

Strand: Reverse

Name: 15892763

Synonym: RC0840

Alternate gene names: NA

Gene position: 793095-792937 (Counterclockwise)

Preceding gene: 15892764

Following gene: 15892762

Centisome position: 62.51

GC content: 32.08

Gene sequence:

>159_bases
ATGATAGAGAAGCAGTTAATTGGACGTAAAGGTGACGGTGGATTTTATCGTTTATCGGTATCAAATGGCAAAAAGATTAA
AGAAGTTATCAATATAAACGACTTATCATATAGTCCTGTTCAAAAAGTAGATATTTTGATCTTGATGCGCTTCTTGTAA

Upstream 100 bases:

>100_bases
TATGACGTAATGAAGTTAATTTCAAGTTCATTACTTGCCTCTCTTCCTGCAAATGATGCTTATCATAAAATAATATGTAA
AGACCCCTGTTCTTGATAAG

Downstream 100 bases:

>100_bases
GTGATTCGGTTTACGGTAAATTTTTTACTGAAATTATCACGGAGTTTTATGTTTATTTAGCAGGTCTAATTTCGTCGGTT
ACGGATAATATTTATGATAT

Product: putative 3-hydroxyacyl-CoA dehydrogenase (FadB)

Products: 3-oxoacyl-CoA; NADH; H+

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MIEKQLIGRKGDGGFYRLSVSNGKKIKEVININDLSYSPVQKVDILILMRFL

Sequences:

>Translated_52_residues
MIEKQLIGRKGDGGFYRLSVSNGKKIKEVININDLSYSPVQKVDILILMRFL
>Mature_52_residues
MIEKQLIGRKGDGGFYRLSVSNGKKIKEVININDLSYSPVQKVDILILMRFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y840_RICCN (Q92HD1)

Other databases:

- EMBL:   AE006914
- PIR:   H97804
- RefSeq:   NP_360477.1
- GeneID:   927803
- GenomeReviews:   AE006914_GR
- KEGG:   rco:RC0840
- NMPDR:   fig|272944.1.peg.840
- BioCyc:   RCON272944:RC0840-MONOMER

Pfam domain/function: NA

EC number: 1.1.1.35; 4.2.1.17

Molecular weight: Translated: 5939; Mature: 5939

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKQLIGRKGDGGFYRLSVSNGKKIKEVININDLSYSPVQKVDILILMRFL
CCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHEECC
>Mature Secondary Structure
MIEKQLIGRKGDGGFYRLSVSNGKKIKEVININDLSYSPVQKVDILILMRFL
CCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-3-hydroxyacyl-CoA; NAD+

Specific reaction: (S)-3-hydroxyacyl-CoA + NAD+ = 3-oxoacyl-CoA + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893