| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892738
Identifier: 15892738
GI number: 15892738
Start: 768707
End: 769969
Strand: Reverse
Name: 15892738
Synonym: RC0815
Alternate gene names: NA
Gene position: 769969-768707 (Counterclockwise)
Preceding gene: 15892739
Following gene: 15892729
Centisome position: 60.69
GC content: 28.03
Gene sequence:
>1263_bases ATGGCCATAACATTAATTTTTAATAAGTTACAAAATTTAATCCCAAATAATACCTCTCCAAAGTCAGCCTCCTATCTTGC TAACGATGAATTTGAGTTTATAACTTCTCCTACTAAGCAAGAAGAAAATACTGATTTTTTAGCAGCGTTAGATAATTCAA TTAAGCAGTATGACGAAAAAAGTGCAAGATGTAATAAAAAAATAGTAGAAGTTCAAGCTAAATATCCTTTTTTAAATTCT AAAATAATCTTCCAAGAAGCAGTAAAAGGTCAGCCAGATACTCTAGGCATCTCTCAAATCAGATTTACAGATCTTTTAAA TAAGCTTGATGGTAATGAAAAAGTAACTAACACATCTAAAAGTAAAGGTTTTTTCAGTACATTTAGTTCATCATTAAAAA CAGTTTATGATTTCGGGGTAAAGAGTTTTAATTTTATAAAAAATACATCTAGTATTCTTTCTTCTAAAGTGGCTGAAACT TTTAATTTTGTGAGTAATAAAGTTTTTTCTTATTTAAATAATAACGCTGAAGAAACATTTAATCTCTTAGATCAACTAGA AACTCTTCCTGATAATGAGTTAGTAGAAGCAATTTTAAACACGTCTGAAAATGCATTAGATGAAGTTTTTGAAAAGATAA CATATAAAAAATTGGTAGAATTAATGAATAATATTTCCGATGAACAAGCACAAAAATTAGTTCATTATATTTTGCCGGAG CATTTTGAAAAATTAATGCAATTTATTCCAGTAGATAAATTAAATACATATATGGATACTACCCTTTCTTTAGAAAAGCT TACCGAGCAGGAACTAAAAAAATTATCAGATGAGGATATTTCTGATGAACAGCTTGAAAATATAATTATTTTAGCAGGAG AAGAAAAGCTTGCAGAAAATTTTGATATTATTCCAAATAAAAATTTAGTAAGAATCATGAGTCATATTTCAAATGATAAG CTAGCACCAATAATTTCGCACGCCTCAGATGAAAGTCTAGTAAGAATCATTGATATTATTGACTCGGATAATCATGATTT ATCGAAATCATTAGTTGGGCAAATAATAGCCTTAATACACGACAAGAAGTGTGTAAAGCAAGAATCAGGTGCAGTATCTG ATAGTGATTCCGGATTCTTTGATTATGAAGATGAAATAAAAGTATCAGACAATCAAGTAGAACACTCTAATAGTGATTTT ACTATGAAATTATCTTATAATTTTGGAGTCTTTAATTATGAAGATGATGTAGTATACTTATAA
Upstream 100 bases:
>100_bases TATAATAAAAAGTTAATAATTATTAGCCTTTATCTTGACCTCCTCATAATTTCTATTATAATGCAATGTTGATTATTATA ATCAGAAATGAGGAAAAATT
Downstream 100 bases:
>100_bases TAAAGCTCTTATGTCATTTCGTTGATTATAGAAATCCAGTAAATGGATTCCTACTTTTCACTAAGAATGGCATAATTGAT TGCGATTTTAGCATCAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MAITLIFNKLQNLIPNNTSPKSASYLANDEFEFITSPTKQEENTDFLAALDNSIKQYDEKSARCNKKIVEVQAKYPFLNS KIIFQEAVKGQPDTLGISQIRFTDLLNKLDGNEKVTNTSKSKGFFSTFSSSLKTVYDFGVKSFNFIKNTSSILSSKVAET FNFVSNKVFSYLNNNAEETFNLLDQLETLPDNELVEAILNTSENALDEVFEKITYKKLVELMNNISDEQAQKLVHYILPE HFEKLMQFIPVDKLNTYMDTTLSLEKLTEQELKKLSDEDISDEQLENIIILAGEEKLAENFDIIPNKNLVRIMSHISNDK LAPIISHASDESLVRIIDIIDSDNHDLSKSLVGQIIALIHDKKCVKQESGAVSDSDSGFFDYEDEIKVSDNQVEHSNSDF TMKLSYNFGVFNYEDDVVYL
Sequences:
>Translated_420_residues MAITLIFNKLQNLIPNNTSPKSASYLANDEFEFITSPTKQEENTDFLAALDNSIKQYDEKSARCNKKIVEVQAKYPFLNS KIIFQEAVKGQPDTLGISQIRFTDLLNKLDGNEKVTNTSKSKGFFSTFSSSLKTVYDFGVKSFNFIKNTSSILSSKVAET FNFVSNKVFSYLNNNAEETFNLLDQLETLPDNELVEAILNTSENALDEVFEKITYKKLVELMNNISDEQAQKLVHYILPE HFEKLMQFIPVDKLNTYMDTTLSLEKLTEQELKKLSDEDISDEQLENIIILAGEEKLAENFDIIPNKNLVRIMSHISNDK LAPIISHASDESLVRIIDIIDSDNHDLSKSLVGQIIALIHDKKCVKQESGAVSDSDSGFFDYEDEIKVSDNQVEHSNSDF TMKLSYNFGVFNYEDDVVYL >Mature_419_residues AITLIFNKLQNLIPNNTSPKSASYLANDEFEFITSPTKQEENTDFLAALDNSIKQYDEKSARCNKKIVEVQAKYPFLNSK IIFQEAVKGQPDTLGISQIRFTDLLNKLDGNEKVTNTSKSKGFFSTFSSSLKTVYDFGVKSFNFIKNTSSILSSKVAETF NFVSNKVFSYLNNNAEETFNLLDQLETLPDNELVEAILNTSENALDEVFEKITYKKLVELMNNISDEQAQKLVHYILPEH FEKLMQFIPVDKLNTYMDTTLSLEKLTEQELKKLSDEDISDEQLENIIILAGEEKLAENFDIIPNKNLVRIMSHISNDKL APIISHASDESLVRIIDIIDSDNHDLSKSLVGQIIALIHDKKCVKQESGAVSDSDSGFFDYEDEIKVSDNQVEHSNSDFT MKLSYNFGVFNYEDDVVYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47707; Mature: 47576
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITLIFNKLQNLIPNNTSPKSASYLANDEFEFITSPTKQEENTDFLAALDNSIKQYDEK CEEHHHHHHHHHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SARCNKKIVEVQAKYPFLNSKIIFQEAVKGQPDTLGISQIRFTDLLNKLDGNEKVTNTSK HHHHCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SKGFFSTFSSSLKTVYDFGVKSFNFIKNTSSILSSKVAETFNFVSNKVFSYLNNNAEETF CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NLLDQLETLPDNELVEAILNTSENALDEVFEKITYKKLVELMNNISDEQAQKLVHYILPE HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HFEKLMQFIPVDKLNTYMDTTLSLEKLTEQELKKLSDEDISDEQLENIIILAGEEKLAEN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCHHHHCC FDIIPNKNLVRIMSHISNDKLAPIISHASDESLVRIIDIIDSDNHDLSKSLVGQIIALIH CCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DKKCVKQESGAVSDSDSGFFDYEDEIKVSDNQVEHSNSDFTMKLSYNFGVFNYEDDVVYL HHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEECCCCEEEC >Mature Secondary Structure AITLIFNKLQNLIPNNTSPKSASYLANDEFEFITSPTKQEENTDFLAALDNSIKQYDEK EEHHHHHHHHHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH SARCNKKIVEVQAKYPFLNSKIIFQEAVKGQPDTLGISQIRFTDLLNKLDGNEKVTNTSK HHHHCHHHHEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC SKGFFSTFSSSLKTVYDFGVKSFNFIKNTSSILSSKVAETFNFVSNKVFSYLNNNAEETF CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH NLLDQLETLPDNELVEAILNTSENALDEVFEKITYKKLVELMNNISDEQAQKLVHYILPE HHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH HFEKLMQFIPVDKLNTYMDTTLSLEKLTEQELKKLSDEDISDEQLENIIILAGEEKLAEN HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCHHHHCC FDIIPNKNLVRIMSHISNDKLAPIISHASDESLVRIIDIIDSDNHDLSKSLVGQIIALIH CCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH DKKCVKQESGAVSDSDSGFFDYEDEIKVSDNQVEHSNSDFTMKLSYNFGVFNYEDDVVYL HHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA