| Definition | Rickettsia conorii str. Malish 7, complete genome. |
|---|---|
| Accession | NC_003103 |
| Length | 1,268,755 |
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The map label for this gene is 15892720
Identifier: 15892720
GI number: 15892720
Start: 750417
End: 751958
Strand: Reverse
Name: 15892720
Synonym: RC0797
Alternate gene names: NA
Gene position: 751958-750417 (Counterclockwise)
Preceding gene: 15892721
Following gene: 15892718
Centisome position: 59.27
GC content: 28.92
Gene sequence:
>1542_bases ATGACGCAAAATAAGCAATCAGTATTTAAAGGTTGGAATTTTTTAAAGCCTAAAGAAGGCGGAGCTAATGAGGTAGGAGA GCATGGCGGAGTATATCAAAGCTTAGACGGTAAAATTACGGCGATGATAAAAAAAGAGGCTTCAAGCTCAAAAAATATAG CCGAGTTTTTAGGATCTCAAATTTTTGAAGCTATAAGTCCTGGAAATGGAGCAAAGGTTAATTTAATTGCTCCTGATGAT TTTAATAAATCTAAAGCCGTTGATTTGCAAATATATGTCAAATCTGAATTTTTTGAGAATTATAGTAGTGATATGTATGT GGACATGGATAAACATATGTCTGCTAAAACTAAACCGAGTTCTTGGTTTAGAAAGGATGGCGGTAGACCACTTTTTATGG GGGCTAGAAATAAATTATTTAGAACCTTAGAAAATGCTTTTAAGGAAATTAAGTATCAGAACTTTGAAAACATTATGCCG GCAAGTTTATTGATCGGCGATTTTGATATACATGTTGGAAATATAGGAGTTATCAGAGATCAAAAAAATCCAAAAACTTT ACCTAAATTAGTAAGAATTGATTTTGCTGGTAGTTTTGATAATTTAACAAATAATATATATCCGCATTCAAGAGCCAAAC ATTTGCCTGGATTCGGTCCCACTAACCATTTTAGAGAATTTCCTTCTAATTTAAGAACAAAAAATCCTAATTTTGCCGAT AGCTTACTTGCAGTTTCTAAAATTGATTTAAGCAAAACTATTGATAAAAGTTTTGATGCATTAACTAAATATTATAGTAA TGAAGCAATTGCAGAATTTGCAAAACAAGCGATGCCAAAGCAATTTAATAATAAACAATCTAAAGAAACAACGCCTGAAG AAATTAAGGCTAGTTTAATAGATACAATGAAAAAAAGGCAAGAATCCTTAAAGGAATACGGCTTAGAAATTAAAATAAAT AGTTTAATTTCTAAAAAATATAGTTTTCCTTATTACGAAGTGAAAGAGCAAGGATTAAAAACATTAATGAAAGAGTATCC TGATTATTTTGCAAAAATTCTTAATTATGAAGAAAGAAAAAAAGGAGGACAAAAACTTAAATTAAGAAATAAAATTACTA CTAATTTTGCAAGAATTTTAGAAATACTTGGTATTAGAGATAGTGCGAAAAAACATTTAATAAAGACAATAAAAAGTTTA AATGAAGATATTAAAGATGAAAGAAATTTAGCTGGTTCTTCTGATAAAATAAAGAAAGAACCAAAACAAAAATTGGTAAA GACAAATATATATGCAAACAGAGAATATGTAGATGCTCTAGAAAAATTTAAGAAAGAAGTTGGAACGGATGATATTGTTA GTGTTACTCCAAGTCAATTAGGTCTAGCTAAAAAAGCTAAACAAAAAGACCAAGATTTATTAAAATTAGATGAAGAAAAT CTAAAACATATAAAGAATCTAAAAGAAAAGATTATGAAGCCTACTCAAACTACTGTAGTTAGTGTTGTTAATAAAAAGTC TACACCGGCTAAAACGAGATAA
Upstream 100 bases:
>100_bases AAAATTAAGTAGAAAACGGTTTCTGATATAAAATAAATAATATGTTTTATAATTATATCAAAATTATCAATGTGGTGTAA ATCATTATAAAGAGGCGAAG
Downstream 100 bases:
>100_bases TAAATGAACCAAGCAACAAGAAGCCTACAACTAAGTAATTAATCAGTAAAAGCCCATATTGCATCGGCAGCTTAATTATC TCAATCTTTTTAGAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDD FNKSKAVDLQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGARNKLFRTLENAFKEIKYQNFENIMP ASLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDNLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFAD SLLAVSKIDLSKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLIDTMKKRQESLKEYGLEIKIN SLISKKYSFPYYEVKEQGLKTLMKEYPDYFAKILNYEERKKGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSL NEDIKDERNLAGSSDKIKKEPKQKLVKTNIYANREYVDALEKFKKEVGTDDIVSVTPSQLGLAKKAKQKDQDLLKLDEEN LKHIKNLKEKIMKPTQTTVVSVVNKKSTPAKTR
Sequences:
>Translated_513_residues MTQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDD FNKSKAVDLQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGARNKLFRTLENAFKEIKYQNFENIMP ASLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDNLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFAD SLLAVSKIDLSKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLIDTMKKRQESLKEYGLEIKIN SLISKKYSFPYYEVKEQGLKTLMKEYPDYFAKILNYEERKKGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSL NEDIKDERNLAGSSDKIKKEPKQKLVKTNIYANREYVDALEKFKKEVGTDDIVSVTPSQLGLAKKAKQKDQDLLKLDEEN LKHIKNLKEKIMKPTQTTVVSVVNKKSTPAKTR >Mature_512_residues TQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDDF NKSKAVDLQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGARNKLFRTLENAFKEIKYQNFENIMPA SLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDNLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFADS LLAVSKIDLSKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLIDTMKKRQESLKEYGLEIKINS LISKKYSFPYYEVKEQGLKTLMKEYPDYFAKILNYEERKKGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSLN EDIKDERNLAGSSDKIKKEPKQKLVKTNIYANREYVDALEKFKKEVGTDDIVSVTPSQLGLAKKAKQKDQDLLKLDEENL KHIKNLKEKIMKPTQTTVVSVVNKKSTPAKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58398; Mature: 58267
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSSKNIAEFLGSQ CCCCHHHHHHCCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEHHHCCCCCHHHHHHHHH IFEAISPGNGAKVNLIAPDDFNKSKAVDLQIYVKSEFFENYSSDMYVDMDKHMSAKTKPS HHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHCCCCCEEEEHHHHCCCCCCCH SWFRKDGGRPLFMGARNKLFRTLENAFKEIKYQNFENIMPASLLIGDFDIHVGNIGVIRD HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCEEEECCEEEEEC QKNPKTLPKLVRIDFAGSFDNLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFAD CCCCHHHHHHHEEECCCCHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHH SLLAVSKIDLSKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHH DTMKKRQESLKEYGLEIKINSLISKKYSFPYYEVKEQGLKTLMKEYPDYFAKILNYEERK HHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH KGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSLNEDIKDERNLAGSSDKIKKE CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PKQKLVKTNIYANREYVDALEKFKKEVGTDDIVSVTPSQLGLAKKAKQKDQDLLKLDEEN HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHH LKHIKNLKEKIMKPTQTTVVSVVNKKSTPAKTR HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TQNKQSVFKGWNFLKPKEGGANEVGEHGGVYQSLDGKITAMIKKEASSSKNIAEFLGSQ CCCHHHHHHCCCCCCCCCCCCCHHHHCCCCEECCCCCEEEEEHHHCCCCCHHHHHHHHH IFEAISPGNGAKVNLIAPDDFNKSKAVDLQIYVKSEFFENYSSDMYVDMDKHMSAKTKPS HHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEHHHHHCCCCCEEEEHHHHCCCCCCCH SWFRKDGGRPLFMGARNKLFRTLENAFKEIKYQNFENIMPASLLIGDFDIHVGNIGVIRD HHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCEEEECCEEEEEC QKNPKTLPKLVRIDFAGSFDNLTNNIYPHSRAKHLPGFGPTNHFREFPSNLRTKNPNFAD CCCCHHHHHHHEEECCCCHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHH SLLAVSKIDLSKTIDKSFDALTKYYSNEAIAEFAKQAMPKQFNNKQSKETTPEEIKASLI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHH DTMKKRQESLKEYGLEIKINSLISKKYSFPYYEVKEQGLKTLMKEYPDYFAKILNYEERK HHHHHHHHHHHHCCCEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH KGGQKLKLRNKITTNFARILEILGIRDSAKKHLIKTIKSLNEDIKDERNLAGSSDKIKKE CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH PKQKLVKTNIYANREYVDALEKFKKEVGTDDIVSVTPSQLGLAKKAKQKDQDLLKLDEEN HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCHHH LKHIKNLKEKIMKPTQTTVVSVVNKKSTPAKTR HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]